RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 CA10Q9NS85 328 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 PSORS1C1Q9UIG5 152 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 GPR160Q9UJ42 338 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 DIMT1Q9UNQ2 313 aaKnown RBP17.35■□□□□ 0.37
USP53-208ENST00000514305 COPS3Q9UNS2 423 aa17.35■□□□□ 0.37
USP53-208ENST00000514305 J3QRE1 110 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 SLC1A7O00341 560 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 IGHA1P01876 353 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 ACSM4P0C7M7 580 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 CX3CR1P49238 355 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 ST3GAL4Q11206 333 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 KRTAP27-1Q3LI81 207 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 ZNF786Q8N393 782 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 YIPF7Q8N8F6 280 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 OR52H1Q8NGJ2 320 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 ABHD4Q8TB40 342 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 C1QTNF5Q9BXJ0 243 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 OPA3Q9H6K4 179 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 MOB1AQ9H8S9 216 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 LRP12Q9Y561 859 aa17.34■□□□□ 0.37
USP53-208ENST00000514305 HIVEP2P31629 2446 aa17.33■□□□□ 0.37
USP53-208ENST00000514305 ANXA2P07355 339 aaKnown RBP17.33■□□□□ 0.36
USP53-208ENST00000514305 RPSAP08865 295 aaKnown RBP17.33■□□□□ 0.36
USP53-208ENST00000514305 DBHP09172 617 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 DANCRP0C864 163 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 FAM157BP0CG42 384 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 PSKH1P11801 424 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 CFL1P23528 166 aaKnown RBP17.33■□□□□ 0.36
USP53-208ENST00000514305 PPP1CBP62140 327 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 HGFACQ04756 655 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 SPOCK1Q08629 439 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 CLEC12BQ2HXU8 276 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 AGAP6Q5VW22 663 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 SLC7A6Q92536 515 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 ITFG2Q969R8 447 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 DOK1Q99704 481 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 ALG8Q9BVK2 526 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 OR10A2Q9H208 303 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 SLCO1C1Q9NYB5 712 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 ZNF391Q9UJN7 358 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 LRRC42Q9Y546 428 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 TLN2Q9Y4G6 2542 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 ZANQ9Y493 2812 aa17.33■□□□□ 0.36
USP53-208ENST00000514305 TMEM269A0A1B0GVZ9 245 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 INAFM1C9JVW0 142 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 PTGES3LE9PB15 166 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 OVOL3O00110 214 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 XRCC2O43543 280 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 XPNPEP2O43895 674 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 SOD3P08294 240 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 CDKN1AP38936 164 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 PSMA6P60900 246 aaKnown RBP17.32■□□□□ 0.36
USP53-208ENST00000514305 TNK1Q13470 666 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 VHLLQ6RSH7 139 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 COLCA1Q6ZS62 124 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 AHSA2Q719I0 299 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 LHFPL3Q86UP9 236 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 SYS1Q8N2H4 156 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 KLHL36Q8N4N3 616 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 PAQR4Q8N4S7 273 aaPredicted RBP17.32■□□□□ 0.36
USP53-208ENST00000514305 NEUROG1Q92886 237 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 PGAM5Q96HS1 289 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 AMELYQ99218 206 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 ERVK13-1Q9NX77 482 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 GNG8Q9UK08 70 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 ERGIC3Q9Y282 383 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 KLHDC2Q9Y2U9 406 aa17.32■□□□□ 0.36
USP53-208ENST00000514305 CAB39Q9Y376 341 aaPredicted RBP17.32■□□□□ 0.36
USP53-208ENST00000514305 E7EQL1 145 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 MT-ND5P03915 603 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 SELEP16581 610 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 EEF1B2P24534 225 aaKnown RBP17.31■□□□□ 0.36
USP53-208ENST00000514305 SERPINF1P36955 418 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 WNT5AP41221 380 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 EVX1P49640 407 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 ZNF85Q03923 595 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 CDONQ4KMG0 1287 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 SYNPRQ8TBG9 265 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 OR51B6Q9H340 312 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 RGCCQ9H4X1 137 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 SNX5Q9Y5X3 404 aa17.31■□□□□ 0.36
USP53-208ENST00000514305 B9A039 149 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 LOC110117498-PIK3R3F6TDL0 507 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 J3QLW9 94 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 PSMD9O00233 223 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 MYL12BO14950 172 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 TBX1O43435 398 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 MRPS14O60783 128 aaKnown RBP17.3■□□□□ 0.36
USP53-208ENST00000514305 ZNF19P17023 458 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 TTKP33981 857 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 THBS4P35443 961 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 GBX2P52951 348 aaPredicted RBP17.3■□□□□ 0.36
USP53-208ENST00000514305 ZNF121P58317 390 aaPredicted RBP17.3■□□□□ 0.36
USP53-208ENST00000514305 TIGD6Q17RP2 521 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 RSPO1Q2MKA7 263 aaPredicted RBP17.3■□□□□ 0.36
USP53-208ENST00000514305 LAIR2Q6ISS4 152 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 MUC15Q8N387 334 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 TTTY10Q9BZA0 68 aa17.3■□□□□ 0.36
USP53-208ENST00000514305 PLK3Q9H4B4 646 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms