RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 HIST1H2BAQ96A08 127 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 MRPL37Q9BZE1 423 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SEC61A2Q9H9S3 476 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TREM1Q9NP99 234 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 FBXO34Q9NWN3 711 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 UNC13CQ8NB66 2214 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ERI3O43414 337 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 IGLV3-1P01715 115 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 PTHLHP12272 177 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 LUMP51884 338 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 PSMA6P60900 246 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 HSPB3Q12988 150 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 AIMP2Q13155 320 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 GPR68Q15743 365 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 C18orf63Q68DL7 685 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SFRP4Q6FHJ7 346 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM200AQ86VY9 491 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF227Q86WZ6 799 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 CBLN2Q8IUK8 224 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 MCEMP1Q8IX19 187 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 C2orf73Q8N5S3 287 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ZDHHC22Q8N966 263 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SLC16A11Q8NCK7 471 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SYNPRQ8TBG9 265 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 MMABQ96EY8 250 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 SAT2Q96F10 170 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ZFP57Q9NU63 452 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ABI3Q9P2A4 366 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 MYEF2Q9P2K5 600 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 FOXD3Q9UJU5 478 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 DAPP1Q9UN19 280 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 HIF3AQ9Y2N7 669 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 V9GY05 133 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM200CA6NKL6 621 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TO15178 435 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 P2RX6O15547 441 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ALOX12BO75342 701 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF888P0CJ79 500 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 LIFP15018 202 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 CAV2P51636 162 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 HCCSP53701 268 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 PRRX1P54821 245 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 EMP2P54851 167 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TLE3Q04726 772 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 EGR4Q05215 589 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TSC22D1Q15714 1073 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF260Q3ZCT1 412 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ACOT7LQ6ZUV0 252 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 FCRLAQ7L513 359 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 NDUFAF7Q7L592 441 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TIPARPQ7Z3E1 657 aaKnown RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ZAR1Q86SH2 424 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 RELL2Q8NC24 303 aaPredicted RBP6.57□□□□□ -1.36
CLIP1-205ENST00000514271 TMEM185AQ8NFB2 350 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 NUBPLQ8TB37 319 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 RNF138Q8WVD3 245 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 PHF21AQ96BD5 680 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 NTNG2Q96CW9 530 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ADAP2Q9NPF8 381 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 EYSQ5T1H1 3165 aa6.57□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF729A6NN14 1252 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 F5H0A9 414 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 KLK10O43240 276 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 DNAJB6O75190 326 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 RGS8P57771 180 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 EGR3Q06889 387 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SNTB1Q13884 538 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 PLEKHN1Q494U1 663 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 CLEC12AQ5QGZ9 265 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 FJX1Q86VR8 437 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SLC35F2Q8IXU6 374 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 GALNT16Q8N428 558 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 ZSCAN4Q8NAM6 433 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 STT3BQ8TCJ2 826 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 DAZLQ92904 295 aaKnown RBP6.56□□□□□ -1.36
CLIP1-205ENST00000514271 BPIFA2Q96DR5 249 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SPSB2Q99619 263 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 OPA3Q9H6K4 179 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 PRTFDC1Q9NRG1 225 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 UQCC1Q9NVA1 299 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 LRFN1Q9P244 771 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 GPR179Q6PRD1 2367 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 GVINP1Q7Z2Y8 2422 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 MPDZO75970 2070 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 LOC101059948A0A1B0GTJ6 334 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 DAPL1A0PJW8 107 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 MCIDASD6RGH6 385 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 CEACAM4O75871 244 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 TOXO94900 526 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SIX6O95475 246 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 S100A8P05109 93 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 FCER2P06734 321 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 STAG3L3P0CL85 134 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 ZNF28P17035 718 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 RAB6AP20340 208 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 SDHAP31040 664 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 MC3RP41968 323 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 KCNJ3P48549 501 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 FOXF1Q12946 379 aa6.56□□□□□ -1.36
CLIP1-205ENST00000514271 CHAF1BQ13112 559 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms