RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 GLRX5Q86SX6 157 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 MRPS24Q96EL2 167 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 C1orf198Q9H425 327 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 SLC39A9Q9NUM3 307 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 MCTS1Q9ULC4 181 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 FAM186AA6NE01 2351 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 PQLC2LA1A4F0 135 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 RAB5AP20339 215 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 THBS2P35442 1172 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 SNU13P55769 128 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 GUCA2BQ16661 112 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 MORN4Q8NDC4 146 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 FGF14Q92915 247 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 GDF2Q9UK05 429 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ICAM2P13598 275 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 TRHRP34981 398 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 OR2A2Q6IF42 318 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 CD200R1LQ6Q8B3 271 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 NANOS1Q8WY41 292 aaKnown RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 CNRIP1Q96F85 164 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 KCNE3Q9Y6H6 103 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 LOC107986453A0A1B0GWG9 222 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 RRP8O43159 456 aaKnown RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 CTAG2O75638 210 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 LCATP04180 440 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 TMEM217Q8N7C4 229 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 OR4S1Q8NGB4 309 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 GNPNAT1Q96EK6 184 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 MRGPRX1Q96LB2 322 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 TSSK2Q96PF2 358 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 ADAT1Q9BUB4 502 aaKnown RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 FOXQ1Q9C009 403 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 SLC35B3Q9H1N7 401 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 hCG_1809904A0A1W2PP81 198 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 A0A1W2PR64 198 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 A0A1W2PRV1 198 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 CEBPZOSA8MTT3 80 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 PHF1O43189 567 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 WNT11O96014 354 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 HLA-HP01893 362 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 DUSP1P28562 367 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 ECH1Q13011 328 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 IL10RAQ13651 578 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 AWAT1Q58HT5 328 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 SECTM1Q8WVN6 248 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 TXN2Q99757 166 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 ZCCHC4Q9H5U6 513 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 CDH20Q9HBT6 801 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 FLVCR1Q9Y5Y0 555 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 C9orf170A2RU37 121 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 HSBP1L1C9JCN9 74 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 SIGLEC5O15389 551 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 HPP00738 406 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 ABOP16442 354 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 EEF1A1P68104 462 aaKnown RBP10.18□□□□□ -0.78
TCOF1-211ENST00000513346 SIGLEC14Q08ET2 396 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF383Q8NA42 475 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 DTWD2Q8NBA8 298 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 OR4D11Q8NGI4 311 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 NUBPLQ8TB37 319 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 SPTSSAQ969W0 71 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 ISOC2Q96AB3 205 aa10.18□□□□□ -0.78
TCOF1-211ENST00000513346 NRXN2Q9P2S2 1712 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 IGLV3-16A0A075B6K0 115 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 C7orf77A4D0Y5 90 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 OGG1O15527 345 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF749O43361 778 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 C1QCP02747 245 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 ANKRD34CP0C6C1 535 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 SNCAP37840 140 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 OR1D5P58170 312 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF345Q14585 488 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 ELAVL1Q15717 326 aaKnown RBP10.17□□□□□ -0.78
TCOF1-211ENST00000513346 EMC4Q5J8M3 183 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 RSPRY1Q96DX4 576 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF681Q96N22 645 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 TEX101Q9BY14 249 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 OR10A5Q9H207 317 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 PADI1Q9ULC6 663 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 SLC22A13Q9Y226 551 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 TRAV36DV7A0A075B6V5 113 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-211ENST00000513346 EFNA3P52797 238 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 C19orf48Q6RUI8 117 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 LINC00346Q8IVM7 164 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 OR11G2Q8NGC1 345 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 OR5D18Q8NGL1 313 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 EID2BQ96D98 161 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 VN1R3Q9BXE9 311 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 METTL9Q9H1A3 318 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 ENY2Q9NPA8 101 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 NXT1Q9UKK6 140 aaKnown RBP10.17□□□□□ -0.78
TCOF1-211ENST00000513346 GPR179Q6PRD1 2367 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 TK1P04183 234 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 CSNK1A1P48729 337 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 POU3F1Q03052 451 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-211ENST00000513346 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 TMEM196Q5HYL7 178 aa10.17□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF770Q6IQ21 691 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms