RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PAPLNO95428 1278 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ITGBL1O95965 494 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 CBR1P16152 277 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 RAB5AP20339 215 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ZBTB25P24278 435 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 SSTR2P30874 369 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 GDNFP39905 211 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 GPR3P46089 330 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 CAPZBP47756 277 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 CNN1P51911 297 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 UCNP55089 124 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 TRA2AQ13595 282 aaKnown RBP eCLIP5.24□□□□□ -1.57
USP38-203ENST00000511739 SLC25A30Q5SVS4 291 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 DTWD2Q8NBA8 298 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 SLC38A9Q8NBW4 561 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 DVL3Q92997 716 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 TSLPQ969D9 159 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 MS4A7Q9GZW8 240 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 SLAMF8Q9P0V8 285 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 AUP1Q9Y679 476 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 B3GALT4O96024 378 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ORM1P02763 201 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ANKRD34CP0C6C1 535 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 BMP2P12643 396 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 NFATC3Q12968 1075 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ACKR1Q16570 336 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 GSG1Q2KHT4 349 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 HES3Q5TGS1 186 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 DHRS7BQ6IAN0 325 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 RBPMS2Q6ZRY4 209 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 ENTHD1Q8IYW4 607 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 SLC16A11Q8NCK7 471 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 MRGPRX4Q96LA9 322 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 TMPRSS5Q9H3S3 457 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 GORASP2Q9H8Y8 452 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 EXOSC3Q9NQT5 275 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 FBXO34Q9NWN3 711 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 LOC102723971A0A1B0GUV8 181 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 C9orf172C9J069 976 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 PDGFBP01127 241 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 GASTP01350 101 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 FURINP09958 794 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 TMIGD3P0DMS9 266 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 GLI4P10075 376 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 IAPPP10997 89 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ST6GAL1P15907 406 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 PPP3CBP16298 524 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 PPICP45877 212 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 OR3A4PP47883 348 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 NKX2-5P52952 324 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 TNFAIP6P98066 277 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 OXA1LQ15070 435 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 SPRED3Q2MJR0 410 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 GGTA1PQ4G0N0 100 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 METRNLQ641Q3 311 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ACSM5Q6NUN0 579 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 CORO6Q6QEF8 472 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 OR52L2PQ8NGH6 319 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 OR1L4Q8NGR5 311 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 OR2A1Q8NGT9 310 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 RNF141Q8WVD5 230 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 YIPF5Q969M3 257 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 HSD17B10Q99714 261 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 WDR61Q9GZS3 305 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 SEBOXQ9HB31 216 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 KCNG2Q9UJ96 466 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 TUBAL3A6NHL2 446 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 METTL12A8MUP2 240 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 M0R296 226 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 H2AFB1P0C5Y9 115 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 PSMB1P20618 241 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 M6PRP20645 277 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 RFX2P48378 723 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 DSCR4P56555 118 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 TMEM267Q0VDI3 215 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 TCTN3Q6NUS6 607 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 CXorf67Q86X51 503 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 PTOV1Q86YD1 416 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 OR8B3Q8NGG8 313 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 OR8B2Q96RD0 313 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 LYSMD1Q96S90 227 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 RASL11BQ9BPW5 248 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ZNF2Q9BSG1 426 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 ADAT1Q9BUB4 502 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 LAT2Q9GZY6 243 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 SLC26A1Q9H2B4 701 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 SLA2Q9H6Q3 261 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 METTL17Q9H7H0 456 aaPredicted RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 ZNF696Q9H7X3 374 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 RYDENQ9NUL5 291 aaKnown RBP5.24□□□□□ -1.57
USP38-203ENST00000511739 DAPP1Q9UN19 280 aa5.24□□□□□ -1.57
USP38-203ENST00000511739 ZNF724A8MTY0 619 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 NUPL2O15504 423 aaKnown RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 UPK1BO75841 260 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 MYF5P13349 255 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 SHC1P29353 583 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ZNF816Q0VGE8 651 aaPredicted RBP5.23□□□□□ -1.57
USP38-203ENST00000511739 ZNF77Q15935 545 aa5.23□□□□□ -1.57
USP38-203ENST00000511739 ETFRF1Q6IPR1 90 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms