RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SLC36A3Q495N2 470 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 FGD3Q5JSP0 725 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 ASPHD2Q6ICH7 369 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 PGAP1Q75T13 922 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 LDLRAD3Q86YD5 345 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 LINC00346Q8IVM7 164 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 GATAD2BQ8WXI9 593 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 TECTBQ96PL2 329 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 ERMAPQ96PL5 475 aaPredicted RBP18.91■□□□□ 0.62
SMAD5-207ENST00000511116 NMNAT3Q96T66 252 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 PITX2Q99697 317 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 FN3KRPQ9HA64 309 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 SMURF1Q9HCE7 757 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 SRA1Q9HD15 236 aaKnown RBP18.91■□□□□ 0.62
SMAD5-207ENST00000511116 TNFRSF19Q9NS68 423 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 UFSP2Q9NUQ7 469 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 ACOXLQ9NUZ1 547 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 KIF17Q9P2E2 1029 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 AURKCQ9UQB9 309 aa18.91■□□□□ 0.62
SMAD5-207ENST00000511116 CD300LBA8K4G0 201 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 NDUFA2O43678 99 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 GMDSO60547 372 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 LCATP04180 440 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 OTX1P32242 354 aaPredicted RBP18.9■□□□□ 0.62
SMAD5-207ENST00000511116 CENPAP49450 140 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 DBPQ10586 325 aaPredicted RBP18.9■□□□□ 0.62
SMAD5-207ENST00000511116 RFX4Q33E94 735 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 HACD2Q6Y1H2 254 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 PNLDC1Q8NA58 520 aaKnown RBP18.9■□□□□ 0.62
SMAD5-207ENST00000511116 KRCC1Q9NPI7 259 aaPredicted RBP18.9■□□□□ 0.62
SMAD5-207ENST00000511116 TRIM36Q9NQ86 728 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 ABCD2Q9UBJ2 740 aa18.9■□□□□ 0.62
SMAD5-207ENST00000511116 FAM32AQ9Y421 112 aaKnown RBP18.9■□□□□ 0.62
SMAD5-207ENST00000511116 IGHV1-69DA0A0B4J2H0 117 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 IGHV1-69P01742 117 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 COX4I1P13073 169 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 NCK1P16333 377 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 HIST1H1CP16403 213 aaKnown RBP18.89■□□□□ 0.61
SMAD5-207ENST00000511116 CA6P23280 308 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 PROK1P58294 105 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 SF3A3Q12874 501 aaKnown RBP eCLIP18.89■□□□□ 0.61
SMAD5-207ENST00000511116 OR8G1Q15617 311 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 LINC01006Q8NI28 216 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 TBC1D15Q8TC07 691 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 FANK1Q8TC84 345 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 SPRYD4Q8WW59 207 aaPredicted RBP18.89■□□□□ 0.61
SMAD5-207ENST00000511116 FAM162AQ96A26 154 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 MAP6Q96JE9 813 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 CCT8L2Q96SF2 557 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 TRIM15Q9C019 465 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 OR52D1Q9H346 318 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 MMADHCQ9H3L0 296 aaPredicted RBP18.89■□□□□ 0.61
SMAD5-207ENST00000511116 MRPL22Q9NWU5 206 aaKnown RBP18.89■□□□□ 0.61
SMAD5-207ENST00000511116 KCNG2Q9UJ96 466 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 RNF114Q9Y508 228 aa18.89■□□□□ 0.61
SMAD5-207ENST00000511116 NDUFAB1O14561 156 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 GPR137BO60478 399 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 RENP00797 406 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 ANOS1P23352 680 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 SLC6A6P31641 620 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 TPTEP56180 551 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 SFRP4Q6FHJ7 346 aaPredicted RBP18.88■□□□□ 0.61
SMAD5-207ENST00000511116 MRPL21Q7Z2W9 205 aaKnown RBP18.88■□□□□ 0.61
SMAD5-207ENST00000511116 OR2AJ1Q8NGZ0 328 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 RBM4BQ9BQ04 359 aaKnown RBP18.88■□□□□ 0.61
SMAD5-207ENST00000511116 ADAT1Q9BUB4 502 aaKnown RBP18.88■□□□□ 0.61
SMAD5-207ENST00000511116 RPRD1BQ9NQG5 326 aaKnown RBP18.88■□□□□ 0.61
SMAD5-207ENST00000511116 DCAF13Q9NV06 445 aaKnown RBP18.88■□□□□ 0.61
SMAD5-207ENST00000511116 KAAG1Q9UBP8 84 aa18.88■□□□□ 0.61
SMAD5-207ENST00000511116 TRAV38-1A0A0B4J264 116 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 OR6C68A6NDL8 312 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 OOEPA6NGQ2 149 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 M0R135 149 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 ADAM20O43506 726 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 IDH3BO43837 385 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 LHBP01229 141 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 IER3P46695 156 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 ZNF92Q03936 586 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 SNAI3Q3KNW1 292 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 METTL11BQ5VVY1 283 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 GCSAMQ8N6F7 178 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 FAM86B1Q8N7N1 296 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 OR4K13Q8NH42 304 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 ZNF799Q96GE5 643 aa18.87■□□□□ 0.61
SMAD5-207ENST00000511116 KCTD14Q9BQ13 255 aaPredicted RBP18.87■□□□□ 0.61
SMAD5-207ENST00000511116 MRPL15Q9P015 296 aaKnown RBP18.87■□□□□ 0.61
SMAD5-207ENST00000511116 C3orf80F5H4A9 247 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 SASH3O75995 380 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 DIRAS1O95057 198 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 ECDO95905 644 aaPredicted RBP18.86■□□□□ 0.61
SMAD5-207ENST00000511116 IGHV4-59P01825 116 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 H2AFXP16104 143 aaPredicted RBP18.86■□□□□ 0.61
SMAD5-207ENST00000511116 TEX36Q5VZQ5 186 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 SPERTQ8NA61 448 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 DDOQ99489 341 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 EFCAB1Q9HAE3 211 aa18.86■□□□□ 0.61
SMAD5-207ENST00000511116 SEMG1P04279 462 aa18.85■□□□□ 0.61
SMAD5-207ENST00000511116 TAF9Q16594 264 aa18.85■□□□□ 0.61
SMAD5-207ENST00000511116 FAM90A1Q86YD7 464 aa18.85■□□□□ 0.61
SMAD5-207ENST00000511116 ZSCAN4Q8NAM6 433 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms