RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	TEX30	Q5JUR7	227 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	SHQ1	Q6PI26	577 aa	Known RBP	10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	PGAP1	Q75T13	922 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	DCXR	Q7Z4W1	244 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	MOGAT3	Q86VF5	341 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	AQP12A	Q8IXF9	295 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	SPIC	Q8N5J4	248 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	IQCF1	Q8N6M8	205 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	DEFB108B	Q8NET1	73 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	ST7L	Q8TDW4	575 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	GIPC3	Q8TF64	312 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	SLCO4A1	Q96BD0	722 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	LRGUK	Q96M69	825 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	FEV	Q99581	238 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	OCEL1	Q9H607	264 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	MED20	Q9H944	212 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	TMEM165	Q9HC07	324 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	BATF3	Q9NR55	127 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	CMC2	Q9NRP2	79 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001	TMEM100	Q9NV29	134 aa		10.11	□□□□□ -0.79
CHFR-208	ENST00000511001		A0A0A6YYJ9	748 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	CD300LB	A8K4G0	201 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	IFNL4	K9M1U5	179 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF593	O00488	134 aa	Predicted RBP	10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	SPARC	P09486	303 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	WNT2	P09544	360 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	GATA3	P23771	443 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	GRK5	P34947	590 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	MDH2	P40926	338 aa	Known RBP	10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	CD200	P41217	278 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	GATA4	P43694	442 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	PRKX	P51817	358 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	MALL	Q13021	153 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	FAM201A	Q5SY85	155 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	GLYATL3	Q5SZD4	288 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	DRAM2	Q6UX65	266 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	HS3ST5	Q8IZT8	346 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	KLHL36	Q8N4N3	616 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	OR2AE1	Q8NHA4	323 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	SPTSSA	Q969W0	71 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	SLAMF6	Q96DU3	332 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	KCNJ15	Q99712	375 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	C7orf69	Q9H7B7	122 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	PCDHB10	Q9UN67	800 aa		10.1	□□□□□ -0.79
CHFR-208	ENST00000511001	DHRS12	A0PJE2	317 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	FAM183A	A6NL82	134 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	FSTL3	O95633	263 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	IFNG	P01579	166 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	SLC2A1	P11166	492 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF12	P17014	697 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	ZNF3	P17036	446 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	PAX2	Q02962	417 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	TUSC1	Q2TAM9	212 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	PRAMEF6	Q5VXH4	476 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	MRPL21	Q7Z2W9	205 aa	Known RBP	10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	MUC20	Q8N307	709 aa	Predicted RBP	10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	TEX29	Q8N6K0	151 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	CELF2-AS1	Q8N7Q2	184 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	OR6K6	Q8NGW6	343 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	NANP	Q8TBE9	248 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	TEX47	Q8TBZ9	253 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001		Q8TCH9	128 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	MYCBP	Q99417	103 aa	Predicted RBP	10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	TMEM246	Q9BRR3	403 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	COPS4	Q9BT78	406 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	MARCH7	Q9H992	704 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	RNPEPL1	Q9HAU8	725 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	CENPM	Q9NSP4	180 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	INSIG2	Q9Y5U4	225 aa		10.09	□□□□□ -0.79
CHFR-208	ENST00000511001	TCRBV3S1	A0A5B6	114 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	RIIAD1	A6NNX1	92 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	ZNF878	C9JN71	531 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001		H3BN98	237 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	FAM20B	O75063	409 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	RGS9	O75916	674 aa	Predicted RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	GLCE	O94923	617 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	PTBP3	O95758	552 aa	Known RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	CA6	P23280	308 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	BLVRA	P53004	296 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	HILS1	P60008	231 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	HOXA4	Q00056	320 aa	Predicted RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	ZNF154	Q13106	437 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	MPPED2	Q15777	294 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	ZNF404	Q494X3	552 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	DNAL1	Q4LDG9	190 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	USP43	Q70EL4	1123 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	SPATC1	Q76KD6	591 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	PRSS45	Q7RTY3	260 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	DPY19L4	Q7Z388	723 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	KLB	Q86Z14	1044 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	TIGD4	Q8IY51	512 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	ZNF418	Q8TF45	676 aa	Predicted RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	DVL3	Q92997	716 aa	Predicted RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	UTP4	Q969X6	686 aa	Known RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	SPSB4	Q96A44	273 aa		10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	DACT3	Q96B18	629 aa	Predicted RBP	10.08	□□□□□ -0.8
CHFR-208	ENST00000511001	AMELY	Q99218	206 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms