RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 A0A1W2PNV4 684 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 LRP5LA4QPB2 252 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 ACAA2P42765 397 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 PSMA6P60900 246 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 GNMTQ14749 295 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 PCGF3Q3KNV8 242 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 DESI1Q6ICB0 168 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 C20orf196Q8IYI0 205 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 SPARTQ8N0X7 666 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 MUC20Q8N307 709 aaPredicted RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 BBS1Q8NFJ9 593 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 SNAPC3Q92966 411 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 ITFG2Q969R8 447 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 S100PBPQ96BU1 408 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 PLPPR2Q96GM1 343 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 MBOAT4Q96T53 435 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 FUNDC2Q9BWH2 189 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 KIAA1456Q9P272 454 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 AASSQ9UDR5 926 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 MPC1Q9Y5U8 109 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 LOC100289279A0A1B0GTE1 492 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 H7C2Y5 167 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 RER1O15258 196 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 SULT1B1O43704 296 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 AMY2AP04746 511 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 ZNF708P17019 499 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 CA6P23280 308 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 RPS25P62851 125 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 ZMYND11Q15326 602 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 NSUN5P2Q63ZY6 315 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 HAGHLQ6PII5 290 aaPredicted RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 ZNF695Q8IW36 515 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 CENPSQ8N2Z9 138 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 OR1K1Q8NGR3 316 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 RNASE6Q93091 150 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 ADAM19Q9H013 955 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 CISD1Q9NZ45 108 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 RPS2P15880 293 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 CDK2P24941 298 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 PCSK6P29122 969 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 PRDX4Q13162 271 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 SMN1Q16637 294 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 CMPK2Q5EBM0 449 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 LPCAT3Q6P1A2 487 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 IGF2-ASQ6U949 168 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 TSEN54Q7Z6J9 526 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 SYT9Q86SS6 491 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 ANGPTL5Q86XS5 388 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 OR5D13Q8NGL4 314 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 KIR2DS1A0A191URI9 304 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 ZNF736B4DX44 427 aaPredicted RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 CCL2P13500 99 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 CD53P19397 219 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 SRMP19623 302 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 KIR2DS4P43632 304 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 TGM4P49221 684 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 EIF5AP63241 154 aaKnown RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 KIR2DS1Q14954 304 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 SWI5Q1ZZU3 235 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 ACSF3Q4G176 576 aaPredicted RBP4.54□□□□□ -1.68
PHF3-210ENST00000509876 GABRG1Q8N1C3 465 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 NANOGP1Q8N7R0 232 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 OR4Q3Q8NH05 313 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 CASTOR1Q8WTX7 329 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 TOMM40LQ969M1 308 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 SPSB1Q96BD6 273 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 OR2M2Q96R28 347 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 PLA2G12AQ9BZM1 189 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 PRELID3BQ9Y3B1 194 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 FLVCR1Q9Y5Y0 555 aa4.54□□□□□ -1.68
PHF3-210ENST00000509876 C13orf42A0A1B0GVH6 325 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 E9PI62 339 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 DHRS3O75911 302 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 SNAPC5O75971 98 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 IL1AP01583 271 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 GNLYP22749 145 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 GPR6P46095 362 aaPredicted RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 EMX1Q04741 257 aaPredicted RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 CAMK2BQ13554 666 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 ZXDCQ2QGD7 858 aaPredicted RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 C12orf73Q69YU5 71 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 ZNF709Q8N972 641 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 ZFP62Q8NB50 900 aaPredicted RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 LRRC29Q8WV35 223 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 HTRA1Q92743 480 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 TMEM45BQ96B21 275 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 KCTD12Q96CX2 325 aaKnown RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 AIFM2Q9BRQ8 373 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 NOX3Q9HBY0 568 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 ZNF629Q9UEG4 869 aaPredicted RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 CGGBP1Q9UFW8 167 aaPredicted RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 TRBV5-3A0A0A0MS03 114 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 IGHV3-64DA0A0J9YX35 117 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 C7orf72A4D263 438 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 OR5B21A6NL26 309 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 BET1O15155 118 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 GSTP1P09211 210 aaKnown RBP4.53□□□□□ -1.68
PHF3-210ENST00000509876 AKAIN1P0CW23 69 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 CD1EP15812 388 aa4.53□□□□□ -1.68
PHF3-210ENST00000509876 CBR1P16152 277 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms