RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 FOXG1P55316 489 aaPredicted RBP13.08□□□□□ -0.32
PHF3-209ENST00000509330 RSPO1Q2MKA7 263 aaPredicted RBP13.08□□□□□ -0.32
PHF3-209ENST00000509330 FAM166AQ6J272 317 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 JMJD6Q6NYC1 403 aaPredicted RBP13.08□□□□□ -0.32
PHF3-209ENST00000509330 TUSC5Q8IXB3 177 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 CHST4Q8NCG5 386 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 GIMAP1Q8WWP7 306 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 THRSPQ92748 146 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 LYZL4Q96KX0 146 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 GPER1Q99527 375 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 NPAP1Q9NZP6 1156 aa13.08□□□□□ -0.32
PHF3-209ENST00000509330 CIB4A0PJX0 185 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 TMEM235A6NFC5 223 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 M0R135 149 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 CTDSPLO15194 276 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 CSN2P05814 226 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 MNDAP41218 407 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 LHX2P50458 406 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 PPIAP62937 165 aaKnown RBP13.07□□□□□ -0.32
PHF3-209ENST00000509330 FCN2Q15485 313 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 TSPO2Q5TGU0 170 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 ZNF799Q96GE5 643 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 CMTM3Q96MX0 182 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 C20orf85Q9H1P6 137 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 KIAA1549Q9HCM3 1950 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 ARPC1BO15143 372 aaKnown RBP13.07□□□□□ -0.32
PHF3-209ENST00000509330 SP1P08047 785 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 NR2C1P13056 603 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 ZNF32P17041 273 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 ZNF93P35789 620 aaPredicted RBP13.07□□□□□ -0.32
PHF3-209ENST00000509330 OR3A4PP47883 348 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 ELFN2Q5R3F8 820 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 ANGPTL5Q86XS5 388 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 MRI1Q9BV20 369 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 BANF2Q9H503 90 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 LDAHQ9H6V9 325 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 TMEM138Q9NPI0 162 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 NOSIPQ9Y314 301 aaKnown RBP13.07□□□□□ -0.32
PHF3-209ENST00000509330 MYO7BQ6PIF6 2116 aa13.07□□□□□ -0.32
PHF3-209ENST00000509330 RBBP9O75884 186 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 DHFRP00374 187 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 H2AFB2P0C5Z0 115 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 GTF2F2P13984 249 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 CCNOP22674 350 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 RCVRNP35243 200 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 LSM6P62312 80 aaKnown RBP13.06□□□□□ -0.32
PHF3-209ENST00000509330 HGFACQ04756 655 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 SLC25A25Q6KCM7 469 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 CHMP1BQ7LBR1 199 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 CPNE4Q96A23 557 aaPredicted RBP13.06□□□□□ -0.32
PHF3-209ENST00000509330 ZNF222Q9UK12 451 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 SGCEO43556 437 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 PLATP00750 562 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 CLDN18P56856 261 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 RRAS2P62070 204 aaPredicted RBP13.06□□□□□ -0.32
PHF3-209ENST00000509330 GRB2P62993 217 aaKnown RBP13.06□□□□□ -0.32
PHF3-209ENST00000509330 KCNMB1Q16558 191 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 RNFT1Q5M7Z0 435 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 PRSS33Q8NF86 280 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 OR56B4Q8NH76 319 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 AKAP1Q92667 903 aaKnown RBP eCLIP13.06□□□□□ -0.32
PHF3-209ENST00000509330 SORCS2Q96PQ0 1159 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 FOXB1Q99853 325 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 NICN1Q9BSH3 213 aa13.06□□□□□ -0.32
PHF3-209ENST00000509330 SF3B5Q9BWJ5 86 aaKnown RBP13.06□□□□□ -0.32
PHF3-209ENST00000509330 MRPL33O75394 65 aaKnown RBP13.05□□□□□ -0.32
PHF3-209ENST00000509330 WISP2O76076 250 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 CCL2P13500 99 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 HLA-DMAP28067 261 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 PRSS3P35030 304 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 UNC119Q13432 240 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 ABLIM2Q6H8Q1 611 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 OR10K1Q8NGX5 313 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 PIGTQ969N2 578 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 PAQR5Q9NXK6 330 aaPredicted RBP13.05□□□□□ -0.32
PHF3-209ENST00000509330 NUBP2Q9Y5Y2 271 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 ATP6V1G1O75348 118 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 CD3DP04234 171 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 ANXA7P20073 488 aaKnown RBP13.05□□□□□ -0.32
PHF3-209ENST00000509330 HTR5AP47898 357 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 SLC16A14Q7RTX9 510 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 ZNF486Q96H40 463 aaPredicted RBP13.05□□□□□ -0.32
PHF3-209ENST00000509330 SEC22CQ9BRL7 303 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 MED28Q9H204 178 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 C12orf49Q9H741 205 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 TMEM38BQ9NVV0 291 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 LOC100509620A0A075B734 347 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 ANKRD20A5PA0PJZ0 165 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 MEGF11A6BM72 1044 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 M0QYG6 137 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 HPXP02790 462 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 CXCL3P19876 107 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 ST3GAL2Q16842 350 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 SLC22A6Q4U2R8 563 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 GLIPR1L1Q6UWM5 242 aa13.05□□□□□ -0.32
PHF3-209ENST00000509330 TMEM104Q8NE00 496 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms