RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 OR8G5Q8NG78 346 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 CYGBQ8WWM9 190 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 RDH5Q92781 318 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 PGAM5Q96HS1 289 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 PIMREGQ9BSJ6 248 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 REPIN1Q9BWE0 567 aaKnown RBP12.79□□□□□ -0.36
RNF4-210ENST00000508235 VCX3BQ9H321 246 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 ZNF391Q9UJN7 358 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 NOP16Q9Y3C1 178 aaKnown RBP12.79□□□□□ -0.36
RNF4-210ENST00000508235 N6AMT1Q9Y5N5 214 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 MAST4O15021 2626 aa12.79□□□□□ -0.36
RNF4-210ENST00000508235 GGT3PA6NGU5 568 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 ZSCAN5BA6NJL1 495 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 H0YAE9 185 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 IGHV1-46P01743 117 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 CD55P08174 381 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 GABRB1P18505 474 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 MAGEB1P43366 347 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 CCL8P80075 99 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 IL5RAQ01344 420 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 CDK5R2Q13319 367 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 CARTPTQ16568 116 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 GLYATL3Q5SZD4 288 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 OR2T2Q6IF00 324 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 FAM57BQ71RH2 274 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 PRSS45Q7RTY3 260 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 OR5AS1Q8N127 324 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 OR10H4Q8NGA5 316 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 OR13G1Q8NGZ3 307 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 C10orf105Q8TEF2 133 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 SPRYD4Q8WW59 207 aaPredicted RBP12.78□□□□□ -0.36
RNF4-210ENST00000508235 ITFG2Q969R8 447 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 SPSB4Q96A44 273 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 RNFT2Q96EX2 444 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 C18orf12Q96KH6 178 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 SAP30LQ9HAJ7 183 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 MSL2Q9HCI7 577 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 BRD7Q9NPI1 651 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 DLL4Q9NR61 685 aa12.78□□□□□ -0.36
RNF4-210ENST00000508235 NKX1-2Q9UD57 310 aaPredicted RBP12.78□□□□□ -0.36
RNF4-210ENST00000508235 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
RNF4-210ENST00000508235 TMEM269A0A1B0GVZ9 245 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 TRIM64BA6NI03 449 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 H7C1Q1 480 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 KRT8P05787 483 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 ACHEP22303 614 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 DDOSTP39656 456 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 MMP16P51512 607 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
RNF4-210ENST00000508235 ZNF92Q03936 586 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 SNCBQ16143 134 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 TSTQ16762 297 aaKnown RBP12.77□□□□□ -0.37
RNF4-210ENST00000508235 ZNF691Q5VV52 312 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 OR2Z1Q8NG97 314 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 ELMOD3Q96FG2 381 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 MRPL48Q96GC5 212 aaKnown RBP12.77□□□□□ -0.37
RNF4-210ENST00000508235 ADI1Q9BV57 179 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 REG4Q9BYZ8 158 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 MOB1AQ9H8S9 216 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 TMEM100Q9NV29 134 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 HSPE1-MOB4S4R3N1 261 aa12.77□□□□□ -0.37
RNF4-210ENST00000508235 IGHV4-30-2A0A087WSY4 118 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 IGHV1-69-2A0A0G2JMI3 117 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 A0A1W2PQL4 384 aaPredicted RBP12.76□□□□□ -0.37
RNF4-210ENST00000508235 CD300LBA8K4G0 201 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 H0YJX3 145 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 PSMD9O00233 223 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 SULT1C4O75897 302 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 HPXP02790 462 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 TNFRSF1AP19438 455 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 GIFP27352 417 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 CAPGP40121 348 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 CRYBB2P43320 205 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 ADARB1P78563 741 aaKnown RBP12.76□□□□□ -0.37
RNF4-210ENST00000508235 RIPK1Q13546 671 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 Q6ZR03 302 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 PLEKHG7Q6ZR37 379 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 FTMTQ8N4E7 242 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 OR2AE1Q8NHA4 323 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 GTF3AQ92664 365 aaKnown RBP12.76□□□□□ -0.37
RNF4-210ENST00000508235 REEP6Q96HR9 211 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 TBX5Q99593 518 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 SLC30A2Q9BRI3 323 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 TTTY10Q9BZA0 68 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 MRPL15Q9P015 296 aaKnown RBP12.76□□□□□ -0.37
RNF4-210ENST00000508235 IL19Q9UHD0 177 aa12.76□□□□□ -0.37
RNF4-210ENST00000508235 DAPL1A0PJW8 107 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 NCR1O76036 304 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 APOL3O95236 402 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 FADS2O95864 444 aaKnown RBP12.75□□□□□ -0.37
RNF4-210ENST00000508235 INHBBP09529 407 aa12.75□□□□□ -0.37
RNF4-210ENST00000508235 DBTP11182 482 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms