RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CLDN8P56748 225 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 TAS2R46P59540 309 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZNF33AQ06730 810 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 TFDP2Q14188 446 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 COX19Q49B96 90 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 TTC19Q6DKK2 380 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 RWDD4Q6NW29 188 aaKnown RBP2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZFP1Q6P2D0 407 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZNF880Q6PDB4 577 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 WDR82Q6UXN9 313 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 SHISA6Q6ZSJ9 500 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 UNC93AQ86WB7 457 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 MYOCDQ8IZQ8 938 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 ARRDC1Q8N5I2 433 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 LRRC75AQ8NAA5 344 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 NECAP1Q8NC96 275 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 GPR26Q8NDV2 337 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 LINC01560Q8TB33 94 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 ITFG1Q8TB96 612 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 ISG20Q96AZ6 181 aaKnown RBP2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 APH1AQ96BI3 265 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 OR10C1Q96KK4 312 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 LINC00477Q96M19 166 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 DOK1Q99704 481 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 RNF5Q99942 180 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 RSPO3Q9BXY4 272 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 CHRAC1Q9NRG0 131 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 MCUBQ9NWR8 336 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 GGA2Q9UJY4 613 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZNF835Q9Y2P0 537 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 PLA2R1Q13018 1463 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 PCDH11XQ9BZA7 1347 aa2.36□□□□□ -2.03
HMGB1P28-201ENST00000507778 NOTCH2Q04721 2471 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 TRAV6A0A075B6T7 132 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 C5orf63A6NC05 138 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ANKRD65E5RJM6 399 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 H0YJW9 148 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZBTB5O15062 677 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 CCNKO75909 580 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 MPZL1O95297 269 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 CCNE2O96020 404 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 GLAP06280 429 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZNF806P0C7X5 589 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZNF286BP0CG31 522 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 CD82P27701 267 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 AP1S2P56377 157 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 TAS2R31P59538 309 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RAB11AP62491 216 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 SPAG1Q07617 926 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 MOBPQ13875 183 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RBMY1FQ15415 496 aaKnown RBP2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RAB11BQ15907 218 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RPEL1Q2QD12 228 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 KLHL40Q2TBA0 621 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZNF829Q3KNS6 432 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 H3F3CQ6NXT2 135 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 FAM122BQ7Z309 247 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 TMEM256Q8N2U0 113 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ZNF709Q8N972 641 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 UBAC2Q8NBM4 344 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 OR5AR1Q8NGP9 310 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 OR52P1PQ8NH57 321 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ESR2Q92731 530 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 SGTBQ96EQ0 304 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 CSPG4P5Q96PW8 444 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RBBP8Q99708 897 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 TBL1YQ9BQ87 522 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 UQCC2Q9BRT2 126 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RSG1Q9BU20 258 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 GGTLC1Q9BX51 225 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 SAMD10Q9BYL1 202 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 C1orf198Q9H425 327 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 C8orf33Q9H7E9 229 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 CRLF2Q9HC73 371 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 CD209Q9NNX6 404 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RRAGDQ9NQL2 400 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 C8orf17Q9NRJ1 99 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 RGS18Q9NS28 235 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 ENOPH1Q9UHY7 261 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 DDX19BQ9UMR2 479 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 MROH7Q68CQ1 1323 aa2.35□□□□□ -2.03
HMGB1P28-201ENST00000507778 TRAV40A0A0B4J280 105 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 GOLGA6L7A0A1B0GV03 622 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 NDUFC2-KCTD14E9PQ53 114 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 TNFRSF11BO00300 401 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 SIVA1O15304 175 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 HSBP1O75506 76 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 GLSO94925 669 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 SCELO95171 688 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 FARS2O95363 451 aaKnown RBP2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 TDP2O95551 362 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 OXTP01178 125 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 CD74P04233 296 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 POLR2MP0CAP2 368 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 GABRG2P18507 467 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 IL1RNP18510 177 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 PPICP45877 212 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 NDUFA8P51970 172 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 CACNG7P62955 275 aa2.34□□□□□ -2.03
HMGB1P28-201ENST00000507778 PITPNAQ00169 270 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms