RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 C9orf16Q9BUW7 83 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 TOR3AQ9H497 397 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 ZNF275Q9NSD4 429 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-209ENST00000506630 LAMP5Q9UJQ1 280 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 TBX1O43435 398 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 PPIHO43447 177 aaKnown RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 BAG2O95816 211 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 ALPLP05186 524 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 ANXA2P07355 339 aaKnown RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 SELEP16581 610 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 ANOS1P23352 680 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 ALDH3A2P51648 485 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 RAD23AP54725 363 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 MRPS11P82912 194 aaKnown RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 TNFAIP6P98066 277 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 RIN1Q13671 783 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 GK2Q14410 553 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 TRIP10Q15642 601 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 LIPNQ5VXI9 398 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 NXNL2Q5VZ03 156 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 Q6ZR03 302 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 PGAP1Q75T13 922 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 MEPCEQ7L2J0 689 aaKnown RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 SLC16A9Q7RTY1 509 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 OR2AE1Q8NHA4 323 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 CNN2Q99439 309 aaKnown RBP11.13□□□□□ -0.63
TCOF1-209ENST00000506630 TEAD3Q99594 435 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 USE1Q9NZ43 259 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 TREM2Q9NZC2 230 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
TCOF1-209ENST00000506630 LRP5LA4QPB2 252 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 SLC22A31A6NKX4 558 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 IQCF6A8MYZ5 107 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 APOC1P02654 83 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 CD55P08174 381 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 ADH4P08319 380 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 ZNF16P17020 682 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-209ENST00000506630 HNF1AP20823 631 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 OPRL1P41146 370 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 CRYBB2P43320 205 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 HCCSP53701 268 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 CDC42P60953 191 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 ZSCAN26Q16670 478 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 HFEQ30201 348 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 GLYATL3Q5SZD4 288 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 AADACL4Q5VUY2 407 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 LRRN1Q6UXK5 716 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 GID4Q8IVV7 300 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 OR8G5Q8NG78 346 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 FAM81AQ8TBF8 368 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 EME1Q96AY2 570 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 ZNF582Q96NG8 517 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-209ENST00000506630 TTTY10Q9BZA0 68 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 YIPF3Q9GZM5 350 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 IMPAD1Q9NX62 359 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 KCNS2Q9ULS6 477 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 KLHDC2Q9Y2U9 406 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 CACNG2Q9Y698 323 aa11.12□□□□□ -0.63
TCOF1-209ENST00000506630 C5orf63A6NC05 138 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 GGT3PA6NGU5 568 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 ANKRD65E5RJM6 399 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 XRCC2O43543 280 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 RP2O75695 350 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 IGHV4-31P0DP07 118 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 GZMKP49863 264 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 CHN2P52757 468 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 ZNF121P58317 390 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-209ENST00000506630 EFNB1P98172 346 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 SRSF2Q01130 221 aaKnown RBP11.11□□□□□ -0.63
TCOF1-209ENST00000506630 ZNF92Q03936 586 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 GABPB1Q06547 395 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-209ENST00000506630 TIGD6Q17RP2 521 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 GFOD2Q3B7J2 385 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 SPRNQ5BIV9 151 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 FAM57BQ71RH2 274 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 KRT77Q7Z794 578 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 OR10AD1Q8NGE0 317 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 SPRYD4Q8WW59 207 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-209ENST00000506630 ITLN1Q8WWA0 313 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 PGAM5Q96HS1 289 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 SP140LQ9H930 580 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 COPS3Q9UNS2 423 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 LRP12Q9Y561 859 aa11.11□□□□□ -0.63
TCOF1-209ENST00000506630 H0YL77 283 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 PSMD9O00233 223 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 MLNRO43193 412 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 LILRA1O75019 489 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 TACSTD2P09758 323 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 TNFRSF1AP19438 455 aa11.1□□□□□ -0.63
TCOF1-209ENST00000506630 ALOX5APP20292 161 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms