RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TMEM246Q9BRR3 403 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 CHRDL1Q9BU40 450 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 HES7Q9BYE0 225 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 ULBP1Q9BZM6 244 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 OR11A1Q9GZK7 315 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 ZSCAN16Q9H4T2 348 aaPredicted RBP3.98□□□□□ -1.77
HERC4-213ENST00000506515 NIPAL2Q9H841 368 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 METTL7AQ9H8H3 244 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 IL26Q9NPH9 171 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 AGPAT4Q9NRZ5 378 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 U3KQA8 63 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 NIPBLQ6KC79 2804 aaeCLIP3.98□□□□□ -1.77
HERC4-213ENST00000506515 A0A1W2PQ67 120 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 WI2-2373I1.2A0A1W2PRP0 233 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 CCDC182A6NF36 153 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 C12orf77C9JDV5 145 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 POLR1CO15160 346 aaPredicted RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 TOX3O15405 576 aaPredicted RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 PALMO75781 387 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 OR7A10O76100 309 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 SNX4O95219 450 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 MOSP00540 346 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 PAEPP09466 180 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 ADRB3P13945 408 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 PBLDP30039 288 aaPredicted RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 ZNF133P52736 654 aaPredicted RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 DAOAP59103 153 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 ACTR3P61158 418 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 RPS15P62841 145 aaKnown RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 RPS24P62847 133 aaKnown RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 CDC20Q12834 499 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 GNMTQ14749 295 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 CYTH1Q15438 398 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 DGUOKQ16854 277 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 DEFB109BQ30KR1 87 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 PRAMEF5Q5TYX0 476 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 PRAMEF6Q5VXH4 476 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 CTRB2Q6GPI1 263 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 C6orf89Q6UWU4 347 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 ACP7Q6ZNF0 438 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 PIANPQ8IYJ0 282 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 FAM71E2Q8N5Q1 922 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 FBXL13Q8NEE6 735 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 OR10G6Q8NH81 332 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 CXorf40AQ8TE69 158 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 ACOT11Q8WXI4 607 aaPredicted RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 IP6K3Q96PC2 410 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 NRTNQ99748 197 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 MRPL40Q9NQ50 206 aaKnown RBP3.97□□□□□ -1.77
HERC4-213ENST00000506515 CISHQ9NSE2 258 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 RAB20Q9NX57 234 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 ZNF225Q9UK10 706 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 FADS3Q9Y5Q0 445 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 PEX16Q9Y5Y5 336 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 ABCA2Q9BZC7 2435 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 MED13LQ71F56 2210 aa3.97□□□□□ -1.77
HERC4-213ENST00000506515 A0A1W2PNU3 283 aaPredicted RBP3.96□□□□□ -1.78
HERC4-213ENST00000506515 OR5K4A6NMS3 321 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 LRRIQ3A6PVS8 624 aaPredicted RBP3.96□□□□□ -1.78
HERC4-213ENST00000506515 C21orf140B9A014 251 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 KRTAP4-16G5E9R7 235 aaPredicted RBP3.96□□□□□ -1.78
HERC4-213ENST00000506515 CETN3O15182 167 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 HLA-DRAP01903 254 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 RHOCP08134 193 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 ERVK-25P63136 954 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 ADIGQ0VDE8 80 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 LRRC74BQ6ZQY2 392 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 C19orf35Q6ZS72 473 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 NANOGNBQ7Z5D8 188 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 EGFL6Q8IUX8 553 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 SLC22A9Q8IVM8 553 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 IQCKQ8N0W5 287 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 AKR7LQ8NHP1 331 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 STARD8Q92502 1023 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 KLK6Q92876 244 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 ZNF396Q96N95 335 aaPredicted RBP3.96□□□□□ -1.78
HERC4-213ENST00000506515 MYCBPQ99417 103 aaPredicted RBP3.96□□□□□ -1.78
HERC4-213ENST00000506515 RIOK2Q9BVS4 552 aaKnown RBP3.96□□□□□ -1.78
HERC4-213ENST00000506515 SRMSQ9H3Y6 488 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 NT5MQ9NPB1 228 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 ADAP2Q9NPF8 381 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 CCL28Q9NRJ3 127 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 DMAC2Q9NW81 257 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 CLCF1Q9UBD9 225 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 N6AMT1Q9Y5N5 214 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 CACNG2Q9Y698 323 aa3.96□□□□□ -1.78
HERC4-213ENST00000506515 DIDO1Q9BTC0 2240 aaKnown RBP3.96□□□□□ -1.78
HERC4-213ENST00000506515 HIVEP3Q5T1R4 2406 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 F8P00451 2351 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 IGHV5-10-1A0A0J9YXX1 117 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 GOLGA6L7A0A1B0GV03 622 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 A0A1W2PPE3 182 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 C12orf71A8MTZ7 269 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 H0Y8G0 127 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 CCNCP24863 283 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 OR1E1P30953 314 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 SULT1E1P49888 294 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 ART3Q13508 389 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
HERC4-213ENST00000506515 CHRNA6Q15825 494 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms