RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 CD300AQ9UGN4 299 aa20.59■□□□□ 0.89
HERC4-212ENST00000505760 SOX21Q9Y651 276 aaPredicted RBP20.59■□□□□ 0.89
HERC4-212ENST00000505760 SNX3O60493 162 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 RPS27P42677 84 aaKnown RBP20.58■□□□□ 0.89
HERC4-212ENST00000505760 IL13RA1P78552 427 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 MPPED2Q15777 294 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 PRR31Q5SQ13 230 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 WDR25Q64LD2 544 aaPredicted RBP20.58■□□□□ 0.89
HERC4-212ENST00000505760 RPL13AP3Q6NVV1 102 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 CPLX4Q7Z7G2 160 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 CYB561A3Q8NBI2 242 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 OR2T4Q8NH00 348 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 ADAT1Q9BUB4 502 aaKnown RBP20.58■□□□□ 0.89
HERC4-212ENST00000505760 MMADHCQ9H3L0 296 aaPredicted RBP20.58■□□□□ 0.89
HERC4-212ENST00000505760 UNKLQ9H9P5 680 aaKnown RBP20.58■□□□□ 0.89
HERC4-212ENST00000505760 FN3KRPQ9HA64 309 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 CDH10Q9Y6N8 788 aa20.58■□□□□ 0.89
HERC4-212ENST00000505760 TVP23AA6NH52 213 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 CD300LBA8K4G0 201 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 KRT36O76013 467 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 KCNJ8Q15842 424 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 SNAI3Q3KNW1 292 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 FITM2Q8N6M3 262 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 OR10S1Q8NGN2 331 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 TECTBQ96PL2 329 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 RNF7Q9UBF6 113 aa20.57■□□□□ 0.88
HERC4-212ENST00000505760 GGT3PA6NGU5 568 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 WIPF1O43516 503 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 ENSAO43768 121 aaKnown RBP20.56■□□□□ 0.88
HERC4-212ENST00000505760 GMDSO60547 372 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 FGF12P61328 243 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 ZNF92Q03936 586 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 BRD3OSQ6XYD6 125 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 ZNF841Q6ZN19 808 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 BOLLQ8N9W6 283 aaKnown RBP20.56■□□□□ 0.88
HERC4-212ENST00000505760 OR2AE1Q8NHA4 323 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 ZNF696Q9H7X3 374 aa20.56■□□□□ 0.88
HERC4-212ENST00000505760 MDFIC2A0A1B0GVS7 189 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 BHLHE40O14503 412 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 PSMB10P40306 273 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 NPY4RP50391 375 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 GPR157Q5UAW9 335 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 SFRP4Q6FHJ7 346 aaPredicted RBP20.55■□□□□ 0.88
HERC4-212ENST00000505760 DRAM2Q6UX65 266 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 LINC00471Q8N535 108 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 OR9Q2Q8NGE9 314 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 OR51L1Q8NGJ5 315 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 OR4C15Q8NGM1 316 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 ZDHHC16Q969W1 377 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 COPS4Q9BT78 406 aa20.55■□□□□ 0.88
HERC4-212ENST00000505760 POM121CA8CG34 1229 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 TNFRSF11BO00300 401 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 MXRA7P84157 204 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 HOXA4Q00056 320 aaPredicted RBP20.54■□□□□ 0.88
HERC4-212ENST00000505760 TAF13Q15543 124 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 OR8B8Q15620 311 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 GLYATL3Q5SZD4 288 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 CD276Q5ZPR3 534 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 C16orf87Q6PH81 154 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 LYPD4Q6UWN0 246 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 C16orf89Q6UX73 402 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 SPATC1Q76KD6 591 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 DCXRQ7Z4W1 244 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 PLPP7Q8NBV4 271 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 DDOQ99489 341 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 BTBD10Q9BSF8 475 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 TBC1D23Q9NUY8 699 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 NDE1Q9NXR1 346 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 IL20Q9NYY1 176 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 MRPL15Q9P015 296 aaKnown RBP20.54■□□□□ 0.88
HERC4-212ENST00000505760 KIF17Q9P2E2 1029 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 ERVK-18Q9QC07 812 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 TAGLN3Q9UI15 199 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 N6AMT1Q9Y5N5 214 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 LYVE1Q9Y5Y7 322 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 COMMD3-BMI1R4GMX3 469 aa20.54■□□□□ 0.88
HERC4-212ENST00000505760 C22orf46C9J442 243 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 C3orf80F5H4A9 247 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 LGALS8O00214 317 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 HOXA3O43365 443 aaPredicted RBP20.53■□□□□ 0.88
HERC4-212ENST00000505760 SPARCP09486 303 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 OTX1P32242 354 aaPredicted RBP20.53■□□□□ 0.88
HERC4-212ENST00000505760 HMGA2P52926 109 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 BPIFB3P59826 476 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 DEFB112Q30KQ8 113 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 DEFB107AQ8IZN7 70 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 SLC37A3Q8NCC5 494 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 OR9Q1Q8NGQ5 310 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 ZNRF4Q8WWF5 429 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 TAF15Q92804 592 aaKnown RBP eCLIP20.53■□□□□ 0.88
HERC4-212ENST00000505760 PCGF1Q9BSM1 259 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 TRIM36Q9NQ86 728 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 CENPMQ9NSP4 180 aa20.53■□□□□ 0.88
HERC4-212ENST00000505760 PTBP3O95758 552 aaKnown RBP20.52■□□□□ 0.88
HERC4-212ENST00000505760 FMO3P31513 532 aa20.52■□□□□ 0.88
HERC4-212ENST00000505760 PRKXP51817 358 aa20.52■□□□□ 0.88
HERC4-212ENST00000505760 SPATS1Q496A3 300 aa20.52■□□□□ 0.88
HERC4-212ENST00000505760 CYP2R1Q6VVX0 501 aa20.52■□□□□ 0.88
HERC4-212ENST00000505760 LNX2Q8N448 690 aa20.52■□□□□ 0.88
HERC4-212ENST00000505760 SPERTQ8NA61 448 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms