RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 FAM210AQ96ND0 272 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 PLEK2Q9NYT0 353 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 ATPIF1Q9UII2 106 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 V9GYS6 101 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 M0R135 149 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 NME2P1O60361 137 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 DHRS3O75911 302 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 SYNGR4O95473 234 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 MELTFP08582 738 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 ANXA3P12429 323 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 NME2P22392 152 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 GZMKP49863 264 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 PMPCAQ10713 525 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 PLA2G7Q13093 441 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 CACNA1CQ13936 2221 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 SULF2Q8IWU5 870 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR52N4Q8NGI2 321 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR4D6Q8NGJ1 314 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR13C9Q8NGT0 318 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF799Q96GE5 643 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 HYLS1Q96M11 299 aa15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 FYTTD1Q96QD9 318 aaKnown RBP15.2■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR5H15A6NDH6 313 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 SNRPGP15A8MWD9 76 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 GMDSO60547 372 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 SNAPC5O75971 98 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 PRF1P14222 555 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 CD46P15529 392 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 CLDN15P56746 228 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 TNK1Q13470 666 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 CDK10Q15131 360 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 MTFR2Q6P444 385 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 IGF2-ASQ6U949 168 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 DTX1Q86Y01 620 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 PNLDC1Q8NA58 520 aaKnown RBP15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 DMRTB1Q96MA1 342 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 SIGLEC12Q96PQ1 595 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 TTTY12Q9BZ98 90 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 RANBP3Q9H6Z4 567 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 UPB1Q9UBR1 384 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 MCTS1Q9ULC4 181 aaKnown RBP15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 ING4Q9UNL4 249 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 A8MV72 311 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 SGCEO43556 437 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 LMX1BO60663 402 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 KDM4BO94953 1096 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 ACTL6AO96019 429 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 SP1P08047 785 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 CPN1P15169 458 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 LHX2P50458 406 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 QRFPP83859 136 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 GALK2Q01415 458 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZMYND11Q15326 602 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF627Q7L945 461 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 MDS2Q8NDY4 140 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 KCNG3Q8TAE7 436 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 GCDHQ92947 438 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 RGCCQ9H4X1 137 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 NOX3Q9HBY0 568 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 TIMM10BQ9Y5J6 103 aa15.19■□□□□ 0.02
TRAPPC11-204ENST00000505676 USP34Q70CQ2 3546 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 TMEM14DPA8MWL7 114 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 ICMTO60725 284 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 FARS2O95363 451 aaKnown RBP15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF708P17019 499 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 ALDH3B1P43353 468 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 NKX2-5P52952 324 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 RIPPLY1Q0D2K3 151 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 FAPQ12884 760 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 SFRP4Q6FHJ7 346 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 NCCRP1Q6ZVX7 275 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 CAPSLQ8WWF8 208 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 AQP3Q92482 292 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 FOXB1Q99853 325 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 SLA2Q9H6Q3 261 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 CRLF2Q9HC73 371 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 ACKR4Q9NPB9 350 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 IL17BQ9UHF5 180 aa15.18■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF724A8MTY0 619 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 CDRT15L2A8MXV6 281 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 SULT1A3P0DMM9 295 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 SULT1A4P0DMN0 295 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 GTF2F2P13984 249 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 CRYGSP22914 178 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 SLC6A9P48067 706 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 STARP49675 285 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 PLGLB1Q02325 96 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 KRTAP27-1Q3LI81 207 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 AWAT2Q6E213 333 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZNF782Q6ZMW2 699 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR5AS1Q8N127 324 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 GALNT16Q8N428 558 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 ZFAND1Q8TCF1 268 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 ROBO4Q8WZ75 1007 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 SEH1LQ96EE3 360 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 FAM71F1Q96KD3 344 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 MRPL15Q9P015 296 aaKnown RBP15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 OR6C6A6NF89 314 aa15.17■□□□□ 0.02
TRAPPC11-204ENST00000505676 F5H5K5 113 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms