RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 FAM46AQ96IP4 442 aaKnown RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 RSRC1Q96IZ7 334 aaKnown RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 HSH2DQ96JZ2 352 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 C7orf34Q96L11 122 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 WDFY2Q96P53 400 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DUX5Q96PT3 197 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 TBX15Q96SF7 602 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DDOQ99489 341 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 CHIAQ9BZP6 476 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 SIRPDQ9H106 197 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DPAGT1Q9H3H5 408 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 GORASP2Q9H8Y8 452 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 RNPEPL1Q9HAU8 725 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 DCAF13Q9NV06 445 aaKnown RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 PTTG3PQ9NZH4 202 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 RHCGQ9UBD6 479 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 AURKCQ9UQB9 309 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF281Q9Y2X9 895 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 CAB39Q9Y376 341 aaPredicted RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 FAM32AQ9Y421 112 aaKnown RBP5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 IER3IP1Q9Y5U9 82 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 CAPN7Q9Y6W3 813 aa5.06□□□□□ -1.6
LSM3P4-201ENST00000502948 UNC119BA6NIH7 251 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CD300LBA8K4G0 201 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 M0R135 149 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 SOCS2O14508 198 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 XRCC2O43543 280 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CCDC22O60826 627 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 FAM20BO75063 409 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 GPANK1O95872 356 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 SEMG1P04279 462 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 COX4I1P13073 169 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 H2AFXP16104 143 aaPredicted RBP5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 NOS3P29474 1203 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 GRK5P34947 590 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 IFNGR2P38484 337 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 YAP1P46937 504 aaKnown RBP5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 GSK3BP49841 420 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 HMGA2P52926 109 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 BLVRAP53004 296 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 GUCA2AQ02747 115 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 TAF9Q16594 264 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 SPATS1Q496A3 300 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CDONQ4KMG0 1287 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 MIDNQ504T8 468 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 FGD3Q5JSP0 725 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 ASPHD2Q6ICH7 369 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CGB2Q6NT52 195 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 LYPD2Q6UXB3 125 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 BRD3OSQ6XYD6 125 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CFAP77Q6ZQR2 320 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 KRT74Q7RTS7 529 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 OR5AS1Q8N127 324 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 GCSAMQ8N6F7 178 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 OR2AJ1Q8NGZ0 328 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 LINC01006Q8NI28 216 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 C8orf46Q8TAG6 207 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 SPRYD4Q8WW59 207 aaPredicted RBP5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 RCN3Q96D15 328 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF799Q96GE5 643 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 MAP6Q96JE9 813 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 PITX2Q99697 317 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CDADC1Q9BWV3 514 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 TLNRD1Q9H1K6 362 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 OR52D1Q9H346 318 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 SP140LQ9H930 580 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 ARGLU1Q9NWB6 273 aaPredicted RBP5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 C14orf119Q9NWQ9 140 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 IL20Q9NYY1 176 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 PDP1Q9P0J1 537 aaPredicted RBP5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CTSZQ9UBR2 303 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 POLR1DQ9Y2S0 133 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 RNF114Q9Y508 228 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 CMYA5Q8N3K9 4069 aa5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
LSM3P4-201ENST00000502948 VWFP04275 2813 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 WNK1Q9H4A3 2382 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 OR6C68A6NDL8 312 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 SLC22A31A6NKX4 558 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 F5H5K5 113 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 RNASEK-C17orf49H0YIS7 233 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 BHLHE40O14503 412 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 GSTA4O15217 222 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 GPR137BO60478 399 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 KRT36O76013 467 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 APOC1P02654 83 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 LCATP04180 440 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 HLA-DPB1P04440 258 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 HSD17B1P14061 328 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 HIST1H1CP16403 213 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 ZNF823P16415 610 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 CFL1P23528 166 aaKnown RBP5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 TGFBR2P37173 567 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 GSSP48637 474 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 PRSS12P56730 875 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 TSPAN31Q12999 210 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 KRT72Q14CN4 511 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 SEC23BQ15437 767 aa5.04□□□□□ -1.6
LSM3P4-201ENST00000502948 OR8G1Q15617 311 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms