RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 ERFP50548 548 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 TPTEP56180 551 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 RPL15P61313 204 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 HIST1H3AP68431 136 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 MZT1Q08AG7 82 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 COX10Q12887 443 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 HIST2H3PS2Q5TEC6 136 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 WDR25Q64LD2 544 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 SMARCD3Q6STE5 483 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 COLCA1Q6ZS62 124 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 HIST2H3AQ71DI3 136 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 PGAP1Q75T13 922 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 MRPL21Q7Z2W9 205 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 TMEM86BQ8N661 226 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 PNLDC1Q8NA58 520 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 BHLHE23Q8NDY6 225 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 TBC1D15Q8TC07 691 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 Q8TCH9 128 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 HRASLS5Q96KN8 279 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 ERMAPQ96PL5 475 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 KCTD14Q9BQ13 255 aaPredicted RBP9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 PRDM13Q9H4Q3 707 aa9.28□□□□□ -0.92
UBE2D3-211ENST00000502404 A0A1B0GWJ7 208 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 F5H5K5 113 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 TIMM23O14925 209 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 MLNRO43193 412 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 IDH3BO43837 385 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 GMDSO60547 372 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 HLA-DQA2P01906 255 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 LCATP04180 440 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 MDKP21741 143 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 FUT4P22083 530 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 SLC6A6P31641 620 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 IFNGR2P38484 337 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 MDH1P40925 334 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 CD200P41217 278 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 OMPP47874 163 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 SLC7A2P52569 658 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 RAG2P55895 527 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 FGF12P61328 243 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 HNRNPA0Q13151 305 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 PDCD1Q15116 288 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 OR8G1Q15617 311 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 DEFB112Q30KQ8 113 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 PTCHD4Q6ZW05 846 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 FITM2Q8N6M3 262 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 SPERTQ8NA61 448 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 SPTSSAQ969W0 71 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 TECTBQ96PL2 329 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 ATF6BQ99941 703 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 TRIM15Q9C019 465 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 MMADHCQ9H3L0 296 aaPredicted RBP9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 RNF7Q9UBF6 113 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 KCNG2Q9UJ96 466 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 B9D1Q9UPM9 204 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 SAMD4AQ9UPU9 718 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 LHFPL6Q9Y693 200 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 POMT1Q9Y6A1 747 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 DOCK11Q5JSL3 2073 aa9.27□□□□□ -0.93
UBE2D3-211ENST00000502404 TRAV38-1A0A0B4J264 116 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 IGHV3-64DA0A0J9YX35 117 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 ZNF879B4DU55 563 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 M0QZ24 198 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 LGALS8O00214 317 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 ARPC3O15145 178 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 SHOXO15266 292 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 TOX4O94842 621 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 NDUFA7O95182 113 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 HLA-DPB1P04440 258 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 ACSM4P0C7M7 580 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 COX4I1P13073 169 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 ZNF823P16415 610 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 OMGP23515 440 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 GGT2P36268 569 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 PSMB10P40306 273 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 GSK3BP49841 420 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 SF3A3Q12874 501 aaKnown RBP eCLIP9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 GK2Q14410 553 aaPredicted RBP9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 RFX4Q33E94 735 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 MIDNQ504T8 468 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 METTL11BQ5VVY1 283 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 OTPQ5XKR4 325 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 OLFML2AQ68BL7 652 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 CORO6Q6QEF8 472 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 BRD3OSQ6XYD6 125 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 HACD2Q6Y1H2 254 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 Q6YL49 198 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 ZNF620Q6ZNG0 422 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 SLC26A10Q8NG04 563 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 FANK1Q8TC84 345 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 SSMEM1Q8WWF3 244 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 DACT3Q96B18 629 aaPredicted RBP9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 SLCO4A1Q96BD0 722 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 CCT8L2Q96SF2 557 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 PCGF1Q9BSM1 259 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 WDR76Q9H967 626 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 PRR13Q9NZ81 148 aa9.26□□□□□ -0.93
UBE2D3-211ENST00000502404 NDUFAF4Q9P032 175 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms