RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 SLC25A47Q6Q0C1 308 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ABHD12BQ7Z5M8 362 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 PPP1R3BQ86XI6 285 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 NAXDQ8IW45 347 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 SLC38A6Q8IZM9 456 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 OR5D14Q8NGL3 314 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 OR2AJ1Q8NGZ0 328 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ASB13Q8WXK3 278 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 EDAQ92838 391 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 DUSP23Q9BVJ7 150 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 PNRC2Q9NPJ4 139 aaKnown RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 COQ3Q9NZJ6 369 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 A0A0A6YYD4 124 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 SSX5O60225 188 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 SPDEFO95238 335 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 CD8AP01732 235 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF20P17024 532 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 M6PRP20645 277 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 HRH1P35367 487 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 CD96P40200 585 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 GABREP78334 506 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 RIPPLY1Q0D2K3 151 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 PPP1R1AQ13522 171 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 TMEM176BQ3YBM2 270 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-204ENST00000501271 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
CLIP1-204ENST00000501271 HDDC2Q7Z4H3 204 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 COMMD2Q86X83 199 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 ANGPTL5Q86XS5 388 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OR5AS1Q8N127 324 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 BEST3Q8N1M1 668 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 FADS6Q8N9I5 356 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OR6X1Q8NH79 312 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 SAP25Q8TEE9 199 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 PRRT1Q99946 306 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 DEFB126Q9BYW3 111 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 SELENOIQ9C0D9 397 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 CST11Q9H112 138 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 MOB1AQ9H8S9 216 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 GPR84Q9NQS5 396 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 KCNK7Q9Y2U2 307 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 NOP16Q9Y3C1 178 aaKnown RBP8.72□□□□□ -1.01
CLIP1-204ENST00000501271 CHCHD2Q9Y6H1 151 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-204ENST00000501271 TRIOBPQ9H2D6 2365 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 TEX46H3BTG2 121 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 RLN2P04090 185 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 QDPRP09417 244 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF17P17021 662 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 ZBTB25P24278 435 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 MPZP25189 248 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 CALCRP30988 508 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 TAF13Q15543 124 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 HIST3H3Q16695 136 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 CLVS2Q5SYC1 327 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 LYSMD4Q5XG99 296 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 LIN54Q6MZP7 749 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 TMEM81Q6P7N7 255 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 SLC25A42Q86VD7 318 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 TMEM104Q8NE00 496 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OR4K17Q8NGC6 315 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OR2I1PQ8NGU4 316 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OR10R2Q8NGX6 335 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OR6K3Q8NGY3 331 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 FAM71F1Q96KD3 344 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-204ENST00000501271 C1orf147Q96MC9 270 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-204ENST00000501271 LINC00052Q96N35 136 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OXGR1Q96P68 337 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 SLC26A1Q9H2B4 701 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 C19orf25Q9UFG5 118 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-204ENST00000501271 KIAA1549Q9HCM3 1950 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 MYO7BQ6PIF6 2116 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 RTTNQ86VV8 2226 aa8.72□□□□□ -1.01
CLIP1-204ENST00000501271 OR5H14A6NHG9 310 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 AQP7P3A6NL99 342 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 OR2AT4A6NND4 320 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 B8ZZF3 427 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 E9PLN8 166 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 STK17BO94768 372 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF43P17038 809 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 CASRP41180 1078 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 OR3A4PP47883 348 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 CX3CR1P49238 355 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 PCOLCEQ15113 449 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 GFOD2Q3B7J2 385 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 GLIPR1L1Q6UWM5 242 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 LYG2Q86SG7 212 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF546Q86UE3 836 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF101Q8IZC7 436 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-204ENST00000501271 ELP5Q8TE02 316 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 ST8SIA4Q92187 359 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 ZBTB8AQ96BR9 441 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 LPAR5Q9H1C0 372 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 FN3KRPQ9HA64 309 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 IFT46Q9NQC8 304 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 MED9Q9NWA0 146 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 FBLN5Q9UBX5 448 aa8.71□□□□□ -1.01
CLIP1-204ENST00000501271 FREM2Q5SZK8 3169 aa8.71□□□□□ -1.02
CLIP1-204ENST00000501271 A0A1W2PP11 408 aa8.71□□□□□ -1.02
CLIP1-204ENST00000501271 C5orf63A6NC05 138 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms