RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 KCTD13Q8WZ19 329 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 NOX4Q9NPH5 578 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 FLRT3Q9NZU0 649 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 SLAMF8Q9P0V8 285 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 TISP43B9A030 160 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 CTXN2P0C2S0 81 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 TMEM136Q6ZRR5 245 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 FAM86B1Q8N7N1 296 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 ZNF611Q8N823 705 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 C4orf47A7E2U8 309 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 GPR32O75388 356 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 TMEM164Q5U3C3 297 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 Q8NFD4 153 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 MARCH1Q8TCQ1 289 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.36□□□□□ -1.71
NEAT1-202ENST00000501122 ZNF257Q9Y2Q1 563 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 SPCS1Q9Y6A9 102 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 TCOF1Q13428 1488 aaKnown RBP4.36□□□□□ -1.71
NEAT1-202ENST00000501122 ST6GAL1P15907 406 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 ID2Q02363 134 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 MZT1Q08AG7 82 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 RGL4Q8IZJ4 473 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 MUC20Q8N307 709 aaPredicted RBP4.36□□□□□ -1.71
NEAT1-202ENST00000501122 C2CD4AQ8NCU7 369 aaPredicted RBP4.36□□□□□ -1.71
NEAT1-202ENST00000501122 SEH1LQ96EE3 360 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 MED13Q9UHV7 2174 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 OR5AL1P0C617 328 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 GLIPR1P48060 266 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 ELLP55199 621 aaPredicted RBP4.36□□□□□ -1.71
NEAT1-202ENST00000501122 EEF1DP3Q658K8 133 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 PTRH1Q86Y79 214 aaKnown RBP4.36□□□□□ -1.71
NEAT1-202ENST00000501122 NUS1Q96E22 293 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 FAM71F1Q96KD3 344 aaPredicted RBP4.36□□□□□ -1.71
NEAT1-202ENST00000501122 MS4A4EQ96PG1 132 aa4.36□□□□□ -1.71
NEAT1-202ENST00000501122 BSXQ3C1V8 233 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GCSAMLQ5JQS6 135 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 UBL7Q96S82 380 aaPredicted RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 DIRC2Q96SL1 478 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 EPHX3Q9H6B9 360 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 NPTNQ9Y639 398 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 BLACEA4D250 179 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GABRDO14764 452 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 ZNF880Q6PDB4 577 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 B3GALT5Q9Y2C3 310 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 RHBDD3Q9Y3P4 386 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GCSHP23434 173 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 FPR2P25090 351 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GPNMBQ14956 572 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 EMC4Q5J8M3 183 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 TOP2AP11388 1531 aaKnown RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 APCSP02743 223 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 KLRB1Q12918 225 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 NHLRC1Q6VVB1 395 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GMPPAQ96IJ6 420 aaPredicted RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 ZNF442Q9H7R0 627 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 C2CD4BA6NLJ0 364 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 TSFMP43897 325 aaKnown RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 RAB6CQ53S08 254 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 PRSS36Q5K4E3 855 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 WDR25Q64LD2 544 aaPredicted RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 ARRDC1Q8N5I2 433 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 OR2M7Q8NG81 312 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 OR4C13Q8NGP0 309 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 ZFYVE21Q9BQ24 234 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 TMEM129A0AVI4 362 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GRXCR1A8MXD5 290 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 PHF1O43189 567 aaPredicted RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GJB3O75712 270 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 PRSS1P07477 247 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 SLC19A1P41440 591 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GPR4P46093 362 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 ATP1B3P54709 279 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GKN2Q86XP6 184 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 ASB10Q8WXI3 467 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 SMOC2Q9H3U7 446 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 LSM7Q9UK45 103 aaKnown RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 SLC45A2Q9UMX9 530 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 CHRM2P08172 466 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 SLC25A4P12235 298 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 NTNG2Q96CW9 530 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 TEPSINQ96N21 525 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 GOLGA2P5Q9HBQ8 144 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 LHX9Q9NQ69 397 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 MST1RQ04912 1400 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 DPRXA6NFQ7 191 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 PGPEP1LA6NFU8 196 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 CERS5Q8N5B7 392 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 NRIP2Q9BQI9 281 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 FLT4P35916 1363 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 ZNF660Q6AZW8 331 aaPredicted RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 OR51A2Q8NGJ7 313 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 POM121L2Q96KW2 1035 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 LMF2Q9BU23 707 aaKnown RBP4.35□□□□□ -1.71
NEAT1-202ENST00000501122 RBFOX2O43251 390 aaKnown RBP eCLIP4.35□□□□□ -1.715e-24■■□□□ 12.1
NEAT1-202ENST00000501122 TSPAN13O95857 204 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 DDAH2O95865 285 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 CT45A10P0DMU9 189 aa4.35□□□□□ -1.71
NEAT1-202ENST00000501122 POC1AQ8NBT0 407 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms