RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 AADACL4Q5VUY2 407 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 HIST2H3AQ71DI3 136 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 MEPCEQ7L2J0 689 aaKnown RBP13.03□□□□□ -0.32
NUP50-219ENST00000497960 ENTHD1Q8IYW4 607 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 TRUB1Q8WWH5 349 aaKnown RBP13.03□□□□□ -0.32
NUP50-219ENST00000497960 RFKQ969G6 155 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 TIMD4Q96H15 378 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 ZNF582Q96NG8 517 aaPredicted RBP13.03□□□□□ -0.32
NUP50-219ENST00000497960 CNN2Q99439 309 aaKnown RBP13.03□□□□□ -0.32
NUP50-219ENST00000497960 WDR76Q9H967 626 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 MSL2Q9HCI7 577 aa13.03□□□□□ -0.32
NUP50-219ENST00000497960 H0YAE9 185 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 H0YJX3 145 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 SRD5A1P18405 259 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 KITLGP21583 273 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 PCMT1P22061 227 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 TNFSF4P23510 183 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 HSPA13P48723 471 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 SNRPGP62308 76 aaKnown RBP13.02□□□□□ -0.33
NUP50-219ENST00000497960 ADARB1P78563 741 aaKnown RBP13.02□□□□□ -0.33
NUP50-219ENST00000497960 TNFAIP6P98066 277 aaPredicted RBP13.02□□□□□ -0.33
NUP50-219ENST00000497960 EFNB1P98172 346 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 MVKQ03426 396 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 SLC3A1Q07837 685 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 ECH1Q13011 328 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 CR1LQ2VPA4 569 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 ZNF691Q5VV52 312 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 CCL17Q92583 94 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 RAB1CQ92928 201 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 UBE2FQ969M7 185 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 APOBEC3DQ96AK3 386 aaPredicted RBP13.02□□□□□ -0.33
NUP50-219ENST00000497960 HAVCR1Q96D42 359 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 POFUT1Q9H488 388 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 CLN6Q9NWW5 311 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 TREM2Q9NZC2 230 aa13.02□□□□□ -0.33
NUP50-219ENST00000497960 CD55P08174 381 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 PSKH1P11801 424 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 RAC2P15153 192 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 HTR1FP30939 366 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 DVL1P1P54792 670 aaPredicted RBP13.01□□□□□ -0.33
NUP50-219ENST00000497960 CDK5R2Q13319 367 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 IL18R1Q13478 541 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 EIF2B1Q14232 305 aaKnown RBP13.01□□□□□ -0.33
NUP50-219ENST00000497960 SNCBQ16143 134 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 AVPI1Q5T686 147 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 MEDAGQ5VYS4 303 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 SHFQ7M4L6 423 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 DCXRQ7Z4W1 244 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 GLCCI1Q86VQ1 547 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 TIGD4Q8IY51 512 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 C8orf59Q8N0T1 100 aaPredicted RBP13.01□□□□□ -0.33
NUP50-219ENST00000497960 TEAD3Q99594 435 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 MARCH7Q9H992 704 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 PTTG3PQ9NZH4 202 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 WARS2Q9UGM6 360 aaKnown RBP13.01□□□□□ -0.33
NUP50-219ENST00000497960 CYB5R1Q9UHQ9 305 aa13.01□□□□□ -0.33
NUP50-219ENST00000497960 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.01□□□□□ -0.33
NUP50-219ENST00000497960 ANK3Q12955 4377 aaKnown RBP13.01□□□□□ -0.33
NUP50-219ENST00000497960 SNTNA6NMZ2 147 aa13□□□□□ -0.33
NUP50-219ENST00000497960 ZNF593O00488 134 aaPredicted RBP13□□□□□ -0.33
NUP50-219ENST00000497960 WNT9BO14905 357 aa13□□□□□ -0.33
NUP50-219ENST00000497960 ENTPD6O75354 484 aa13□□□□□ -0.33
NUP50-219ENST00000497960 POU4F2Q12837 409 aa13□□□□□ -0.33
NUP50-219ENST00000497960 OCLNQ16625 522 aa13□□□□□ -0.33
NUP50-219ENST00000497960 FBXW12Q6X9E4 464 aa13□□□□□ -0.33
NUP50-219ENST00000497960 IL17RELQ6ZVW7 336 aa13□□□□□ -0.33
NUP50-219ENST00000497960 DPY19L4Q7Z388 723 aa13□□□□□ -0.33
NUP50-219ENST00000497960 PEG10Q86TG7 708 aaKnown RBP13□□□□□ -0.33
NUP50-219ENST00000497960 OR2Z1Q8NG97 314 aa13□□□□□ -0.33
NUP50-219ENST00000497960 OR51G2Q8NGK0 314 aa13□□□□□ -0.33
NUP50-219ENST00000497960 RAB39BQ96DA2 213 aa13□□□□□ -0.33
NUP50-219ENST00000497960 Q96MT0 163 aa13□□□□□ -0.33
NUP50-219ENST00000497960 ATF6BQ99941 703 aa13□□□□□ -0.33
NUP50-219ENST00000497960 AASSQ9UDR5 926 aa13□□□□□ -0.33
NUP50-219ENST00000497960 WIPI2Q9Y4P8 454 aa13□□□□□ -0.33
NUP50-219ENST00000497960 CACNG2Q9Y698 323 aa13□□□□□ -0.33
NUP50-219ENST00000497960 FAM157AC9JC47 383 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 F5H5K5 113 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 APOL3O95236 402 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 MSMBP08118 114 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 GABRB1P18505 474 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 TNFRSF1AP19438 455 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 LMO4P61968 165 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 HLXQ14774 488 aaPredicted RBP12.99□□□□□ -0.33
NUP50-219ENST00000497960 TEX30Q5JUR7 227 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 SLC16A9Q7RTY1 509 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 SLC35F2Q8IXU6 374 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 OR51F2Q8NH61 342 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 RHOXF1Q8NHV9 184 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 CNIH3Q8TBE1 160 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 MAP6Q96JE9 813 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 MDFIQ99750 246 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 LPAR2Q9HBW0 351 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 LAMP5Q9UJQ1 280 aa12.99□□□□□ -0.33
NUP50-219ENST00000497960 COL6A5A8TX70 2615 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ZNF878C9JN71 531 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms