RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ALOX5APP20292 161 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 SNCAP37840 140 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 RUNX2Q13950 521 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 DNAJB12Q9NXW2 375 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 SCAF4O95104 1147 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 TIMP1P01033 207 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 THEGLP0DJG4 465 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 GLI4P10075 376 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 IGFALSP35858 605 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 PPP1CCP36873 323 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 FAM78AQ5JUQ0 283 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 OR52R1Q8NGF1 315 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 NTNG2Q96CW9 530 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 SNX22Q96L94 193 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 AQP10Q96PS8 301 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 OR5B2Q96R09 309 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 MENTQ9BUN1 341 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 ZNF700Q9H0M5 742 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 PTGES2Q9H7Z7 377 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 BRINP1O60477 761 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 RENP00797 406 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 CST4P01036 141 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 IFNA10P01566 189 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 GLRA1P23415 457 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 SCAND1P57086 179 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 DHCR24Q15392 516 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM128Q5BJH2 165 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 PRSS41Q7RTY9 318 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 CDC20BQ86Y33 519 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 OR10AD1Q8NGE0 317 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 NMNAT2Q9BZQ4 307 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 C19orf53Q9UNZ5 99 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 HDGFL3Q9Y3E1 203 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 LOC390937A0A1W2PQ73 354 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 EREGO14944 169 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 XRCC2O43543 280 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 HEXBP07686 556 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 HKR1P10072 659 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 AFF3P51826 1226 aaKnown RBP11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 ACY1Q03154 408 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 ARFRP1Q13795 201 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 ENPP2Q13822 863 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 HAGHQ16775 308 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 METRNLQ641Q3 311 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 P4HA3Q7Z4N8 544 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 GRASPQ7Z6J2 395 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 PNLDC1Q8NA58 520 aaKnown RBP11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 Q8WTZ3 238 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 ST6GALNAC5Q9BVH7 336 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 OR11A1Q9GZK7 315 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC35B3Q9H1N7 401 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 EMC9Q9Y3B6 208 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 TRBV6-7A0A0A0MS04 114 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 C5AR1P21730 350 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 DHPSP49366 369 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 RPS4Y2Q8TD47 263 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 LINC00615Q96LM1 132 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 C2orf50Q96LR7 162 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 SH3BGRL3Q9H299 93 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 C5orf66Q9H5L9 145 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 UBQLN4Q9NRR5 601 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 LUZP4Q9P127 313 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 FBXL21Q9UKT6 434 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 HEATR5AQ86XA9 2040 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 TRPM6Q9BX84 2022 aa11.69□□□□□ -0.54
GAPVD1-220ENST00000497580 EYSQ5T1H1 3165 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 H0YL77 283 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 CLDN4O14493 209 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 GEMIN2O14893 280 aaKnown RBP11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 SPINT1O43278 529 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 B3GALT2O43825 422 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC35G6P0C7Q6 338 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 CMPK1P30085 196 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 OR3A2P47893 321 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 TAS2R31P59538 309 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 PDGFRLQ15198 375 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 GGNBP1Q5YKI7 109 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 OR10G6Q8NH81 332 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 ERGIC1Q969X5 290 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 MRGPRX3Q96LB0 322 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 LPAR4Q99677 370 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 UCK1Q9HA47 277 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 CENPMQ9NSP4 180 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 HS3ST3B1Q9Y662 390 aa11.68□□□□□ -0.54
GAPVD1-220ENST00000497580 IGLON5A6NGN9 336 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms