RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 DACT3Q96B18 629 aaPredicted RBP14.32□□□□□ -0.12
SMC4-226ENST00000497311 NSL1Q96IY1 281 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 MAP6Q96JE9 813 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 NUDT16L1Q9BRJ7 211 aaKnown RBP14.32□□□□□ -0.12
SMC4-226ENST00000497311 SLC22A4Q9H015 551 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 EGLN3Q9H6Z9 239 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 UFSP2Q9NUQ7 469 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 NOP16Q9Y3C1 178 aaKnown RBP14.32□□□□□ -0.12
SMC4-226ENST00000497311 MGAM2Q2M2H8 2515 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 B2RBV5 119 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 FAM20BO75063 409 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 RNASE1P07998 156 aaKnown RBP14.31□□□□□ -0.12
SMC4-226ENST00000497311 PYCR1P32322 319 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 PRAMEF6Q5VXH4 476 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 WDR25Q64LD2 544 aaPredicted RBP14.31□□□□□ -0.12
SMC4-226ENST00000497311 SHISA2Q6UWI4 295 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 LYPD2Q6UXB3 125 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 C9orf139Q6ZV77 190 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 CYB561A3Q8NBI2 242 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 CDH10Q9Y6N8 788 aa14.31□□□□□ -0.12
SMC4-226ENST00000497311 TRAV40A0A0B4J280 105 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 CD300LBA8K4G0 201 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 CLDN34H7C241 214 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 TNFRSF11BO00300 401 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 BHLHE40O14503 412 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 PHYHO14832 338 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 PLATP00750 562 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 CA6P23280 308 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 RPS27P42677 84 aaKnown RBP14.3□□□□□ -0.12
SMC4-226ENST00000497311 HMGA2P52926 109 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 ZNF92Q03936 586 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 SLC9A3R2Q15599 337 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 MPPED2Q15777 294 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 SNAI3Q3KNW1 292 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 LINC00471Q8N535 108 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 C19orf18Q8NEA5 215 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 OR9Q2Q8NGE9 314 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 OR10S1Q8NGN2 331 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 OR2T4Q8NH00 348 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 DDOQ99489 341 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 FN3KRPQ9HA64 309 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 IL20Q9NYY1 176 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 RNF7Q9UBF6 113 aa14.3□□□□□ -0.12
SMC4-226ENST00000497311 GGT3PA6NGU5 568 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 TVP23AA6NH52 213 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 TMPRSS2O15393 492 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 GMDSO60547 372 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 T-ENOLP0DO92 83 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 CALB2P22676 271 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 OTX1P32242 354 aaPredicted RBP14.29□□□□□ -0.12
SMC4-226ENST00000497311 KCNJ8Q15842 424 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 DRAM2Q6UX65 266 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 ZNF841Q6ZN19 808 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 OR4C15Q8NGM1 316 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 OR2AE1Q8NHA4 323 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 BCAS4Q8TDM0 211 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 ZNRF4Q8WWF5 429 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 BTBD10Q9BSF8 475 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 ADAT1Q9BUB4 502 aaKnown RBP14.29□□□□□ -0.12
SMC4-226ENST00000497311 TRIM15Q9C019 465 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 LYVE1Q9Y5Y7 322 aa14.29□□□□□ -0.12
SMC4-226ENST00000497311 SOX21Q9Y651 276 aaPredicted RBP14.29□□□□□ -0.12
SMC4-226ENST00000497311 GASTP01350 101 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 PSMB10P40306 273 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 NPY4RP50391 375 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 FGF12P61328 243 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 IL13RA1P78552 427 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 ZNF362Q5T0B9 420 aaPredicted RBP14.28□□□□□ -0.12
SMC4-226ENST00000497311 LYPD4Q6UWN0 246 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 CYP2R1Q6VVX0 501 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 RASSF6Q6ZTQ3 369 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 DCXRQ7Z4W1 244 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 ARHGAP24Q8N264 748 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 PLPP7Q8NBV4 271 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 SLC37A3Q8NCC5 494 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 OR51L1Q8NGJ5 315 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 COPS4Q9BT78 406 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 MMADHCQ9H3L0 296 aaPredicted RBP14.28□□□□□ -0.12
SMC4-226ENST00000497311 UNKLQ9H9P5 680 aaKnown RBP14.28□□□□□ -0.12
SMC4-226ENST00000497311 TBC1D23Q9NUY8 699 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 ERVK-18Q9QC07 812 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 TRRAPQ9Y4A5 3859 aa14.28□□□□□ -0.12
SMC4-226ENST00000497311 LGALS8O00214 317 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 ENSAO43768 121 aaKnown RBP14.27□□□□□ -0.13
SMC4-226ENST00000497311 CCNB2O95067 398 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 PTBP3O95758 552 aaKnown RBP14.27□□□□□ -0.13
SMC4-226ENST00000497311 FMO3P31513 532 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 ENTPD1P49961 510 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 TAF13Q15543 124 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 PRR31Q5SQ13 230 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 GLYATL3Q5SZD4 288 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 GPR157Q5UAW9 335 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 CD276Q5ZPR3 534 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 SFRP4Q6FHJ7 346 aaPredicted RBP14.27□□□□□ -0.13
SMC4-226ENST00000497311 C16orf87Q6PH81 154 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 LNX2Q8N448 690 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 BOLLQ8N9W6 283 aaKnown RBP14.27□□□□□ -0.13
SMC4-226ENST00000497311 SPERTQ8NA61 448 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 OR8D4Q8NGM9 314 aa14.27□□□□□ -0.13
SMC4-226ENST00000497311 OR9Q1Q8NGQ5 310 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 282.7 ms