RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZBED3Q96IU2 234 aaPredicted RBP2.7□□□□□ -1.98
VPS36-206ENST00000497149 OR10C1Q96KK4 312 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 PRRC1Q96M27 445 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 XPO6Q96QU8 1125 aaKnown RBP2.7□□□□□ -1.98
VPS36-206ENST00000497149 KCNS3Q9BQ31 491 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 SCRT1Q9BWW7 348 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 ACTR3CQ9C0K3 210 aaPredicted RBP2.7□□□□□ -1.98
VPS36-206ENST00000497149 TDRD3Q9H7E2 651 aaKnown RBP2.7□□□□□ -1.98
VPS36-206ENST00000497149 SPACA1Q9HBV2 294 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 MTFP1Q9UDX5 166 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 GGA2Q9UJY4 613 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 PRELID1Q9Y255 219 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 INSRP06213 1382 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 PLEKHG2Q9H7P9 1386 aa2.7□□□□□ -1.98
VPS36-206ENST00000497149 DOCK9Q9BZ29 2069 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 A0A1B0GTQ1 180 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 A0A1W2PQ67 120 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 C7orf66A4D0T2 115 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 NCBP2LA6PVI3 153 aaKnown RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 H7C0C1 242 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 DNASE2O00115 360 aaPredicted RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 POLR1CO15160 346 aaPredicted RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 SOCS1O15524 211 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 CDC40O60508 579 aaKnown RBP eCLIP2.69□□□□□ -1.98
VPS36-206ENST00000497149 CTAG2O75638 210 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 CD160O95971 181 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 CSTAP01040 98 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 HLA-DQA1P01909 254 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 ERCC1P07992 297 aaPredicted RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 PRKACAP17612 351 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 MSNP26038 577 aaKnown RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 STOMP27105 288 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 OPRK1P41145 380 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 HTR2BP41595 481 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 CDKN2DP55273 166 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 BASP1P80723 227 aaKnown RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 LY6EQ16553 131 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 COX19Q49B96 90 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 NKAIN1Q4KMZ8 207 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 HSP90AA4PQ58FG1 418 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 TCEAL5Q5H9L2 206 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 SAXO2Q658L1 398 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 ZNF880Q6PDB4 577 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 SPESP1Q6UW49 350 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 C12orf54Q6X4T0 127 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 EIF3MQ7L2H7 374 aaKnown RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 SSX9Q7RTT3 188 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 VTCN1Q7Z7D3 282 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 ZNF615Q8N8J6 731 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 TTC29Q8NA56 475 aaPredicted RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 BPIFCQ8NFQ6 507 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 TCEAL3Q969E4 200 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 LINC00477Q96M19 166 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 TRNT1Q96Q11 434 aaKnown RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 ZYG11BQ9C0D3 744 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 OR52D1Q9H346 318 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 CHRAC1Q9NRG0 131 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 SDHAF3Q9NRP4 125 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 STX18Q9P2W9 335 aaKnown RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 PALLDQ8WX93 1383 aa2.69□□□□□ -1.98
VPS36-206ENST00000497149 NUP214P35658 2090 aaPredicted RBP2.69□□□□□ -1.98
VPS36-206ENST00000497149 TUBGCP6Q96RT7 1819 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 IGHV1OR15-9A0A0B4J2B8 117 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 IGKV6-21A0A0C4DH24 114 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 KBTBD11-OT1A0A1B0GTJ5 212 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 PSMD11O00231 422 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 SLC9A3R1O14745 358 aaPredicted RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 DNAJB6O75190 326 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 REM1O75628 298 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 RBBP9O75884 186 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 CCNKO75909 580 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 SEMA3DO95025 777 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 MPZL1O95297 269 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 LSM8O95777 96 aaKnown RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 C1GALT1C1LP0DN25 315 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 KIR3DL2P43630 455 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 SLC11A1P49279 550 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 RAB9AP51151 201 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 SYNJ2BPP57105 145 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 RPS23P62266 143 aaKnown RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 KIR2DS1Q14954 304 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 SHHQ15465 462 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 USF2Q15853 346 aaPredicted RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 DEGS2Q6QHC5 323 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 TPGS1Q6ZTW0 290 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 SLC16A13Q7RTY0 426 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 SNX20Q7Z614 316 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 CBLN2Q8IUK8 224 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 WDFY1Q8IWB7 410 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 FAM71AQ8IYT1 594 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 CBR4Q8N4T8 237 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 PQLC3Q8N755 202 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 ZNF565Q8N9K5 539 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 NECAP1Q8NC96 275 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 OR11H7Q8NGC8 314 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 OR6N1Q8NGY5 312 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 MITD1Q8WV92 249 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 DCPSQ96C86 337 aaKnown RBP2.68□□□□□ -1.98
VPS36-206ENST00000497149 L3HYPDHQ96EM0 354 aa2.68□□□□□ -1.98
VPS36-206ENST00000497149 RNF157Q96PX1 679 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms