RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 GSG1Q2KHT4 349 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 USP50Q70EL3 339 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 ZNF551Q7Z340 670 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 ADAD2Q8NCV1 583 aaKnown RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 FEVQ99581 238 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 PIMREGQ9BSJ6 248 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CXXC4Q9H2H0 198 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 PRDM13Q9H4Q3 707 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 ACER3Q9NUN7 267 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SLCO1C1Q9NYB5 712 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CLEC1BQ9P126 229 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 NPFFO15130 113 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 IDUAP35475 653 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 LAMTOR4Q0VGL1 99 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 LRRC26Q2I0M4 334 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 MOB3CQ70IA8 216 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 RAB40CQ96S21 281 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CNOT2Q9NZN8 540 aaKnown RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 NSG2Q9Y328 171 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TRAV21A0A0B4J279 112 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 NCR1O76036 304 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CD14P08571 375 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 F7P08709 466 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 LIAT1Q6ZQX7 453 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TMEM217Q8N7C4 229 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OR51G2Q8NGK0 314 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OR9A1PQ8NGU1 263 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OR6S1Q8NH40 331 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CREB3L4Q8TEY5 395 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TFAP2CQ92754 450 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SARAFQ96BY9 339 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OR5B2Q96R09 309 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SMIM7Q9BQ49 75 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TMEM9BQ9NQ34 198 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 WNT16Q9UBV4 365 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TRAPPC1Q9Y5R8 145 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 DNAJC15Q9Y5T4 150 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SNX11Q9Y5W9 270 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 C11orf98E9PRG8 122 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CHKB-CPT1BH3BT56 60 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 HAX1O00165 279 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 MT-CO1P00395 513 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 PAFAH1B3Q15102 231 aaKnown RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 PARM1Q6UWI2 310 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 ZNF534Q76KX8 674 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 ACER1Q8TDN7 264 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 DERL3Q96Q80 235 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 ULBP2Q9BZM5 246 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 LOXL2Q9Y4K0 774 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 URB2Q14146 1524 aaKnown RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 TRBV7-9A0A0J9YWB2 115 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 LOC100289279A0A1B0GTE1 492 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 ZNHIT1O43257 154 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 IL2RAP01589 272 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 CKMT2P17540 419 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 PTGER1P34995 402 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 NKX2-1P43699 371 aaPredicted RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 SLC22A6Q4U2R8 563 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 ZDHHC24Q6UX98 284 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 LRRTM3Q86VH5 581 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 OR10W1Q8NGF6 305 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 HSD3B7Q9H2F3 369 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 LHX3Q9UBR4 397 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 OR5V1Q9UGF6 321 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 CYSLTR1Q9Y271 337 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 LOC107984156A0A0G2JMH3 177 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 TMEM129A0AVI4 362 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 TMEM82A0PJX8 343 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 IL1R2P27930 398 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 UCP2P55851 309 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 WDR5P61964 334 aaKnown RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 FUT5Q11128 374 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 LRIT3Q3SXY7 679 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 PLAC9Q5JTB6 97 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 SLC25A30Q5SVS4 291 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 ARL17AQ8IVW1 177 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 OR10G8Q8NGN5 311 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 WDR18Q9BV38 432 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 ZNF552Q9H707 407 aaPredicted RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 AGO3Q9H9G7 860 aaKnown RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 BEX1Q9HBH7 125 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 FBXL12Q9NXK8 326 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 UQCR10Q9UDW1 63 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 MRPL42Q9Y6G3 142 aaKnown RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 SMPD2O60906 423 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 NID1P14543 1247 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 ACHEP22303 614 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 SFT2D3Q587I9 215 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 ETV3LQ6ZN32 361 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 SLC25A2Q9BXI2 301 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 MRPL20Q9BYC9 149 aaKnown RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 G6PC2Q9NQR9 355 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 DNAJB12Q9NXW2 375 aaKnown RBP5.34□□□□□ -1.55
USF3-204ENST00000496826 ZNF391Q9UJN7 358 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 CTTNBP2Q8WZ74 1663 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 CPS1P31327 1500 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 H3BQ85 93 aa5.34□□□□□ -1.55
USF3-204ENST00000496826 FCN3O75636 299 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms