RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 KLHL12Q53G59 568 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 PAQR6Q6TCH4 344 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 TMPRSS11AQ6ZMR5 421 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 PTCHD4Q6ZW05 846 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 GDPD3Q7L5L3 318 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 C6orf120Q7Z4R8 191 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC7A5P1Q8MH63 180 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 FAM71CQ8NEG0 241 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 OR8J1Q8NGP2 316 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 BBS10Q8TAM1 723 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 TMEM45BQ96B21 275 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 ST6GAL2Q96JF0 529 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 ALKBH3Q96Q83 286 aaPredicted RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC38A2Q96QD8 506 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 SDF2Q99470 211 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 TMEM246Q9BRR3 403 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 SPATA5L1Q9BVQ7 753 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 C1QTNF6Q9BXI9 259 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 BCL2L10Q9HD36 194 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 CTPS2Q9NRF8 586 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 POLE3Q9NRF9 147 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 COPZ2Q9P299 210 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 P2RX2Q9UBL9 471 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 MOKQ9UQ07 419 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 LSM2Q9Y333 95 aaKnown RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 RPL36Q9Y3U8 105 aaKnown RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 FLVCR1Q9Y5Y0 555 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 AUP1Q9Y679 476 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 CSPG4Q6UVK1 2322 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 CENPVL1A0A0U1RR11 272 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 MEIOCA2RUB1 952 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 LINC00862A6NCI5 91 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 OR6C65A6NJZ3 312 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 VWC2LB2RUY7 222 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF670-ZNF695F2Z2N8 137 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF208O43345 1280 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 SPRY1O43609 319 aaPredicted RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ORC5O43913 435 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 PRKYO43930 277 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 NOS1APO75052 506 aaPredicted RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ENTPD6O75354 484 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 DBTP11182 482 aaKnown RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 GSTM3P21266 225 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 GRK5P34947 590 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TGFBR1P36897 503 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 IDH3GP51553 393 aaPredicted RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 RAG2P55895 527 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 PPP3R1P63098 170 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 MLLT11Q13015 90 aaPredicted RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 MAB21L1Q13394 359 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 SEC23BQ15437 767 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 EFNB3Q15768 340 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 SSX1Q16384 188 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TSTQ16762 297 aaKnown RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ARHGAP11BQ3KRB8 267 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TBRG1Q3YBR2 411 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 HIKESHIQ53FT3 197 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 DDI2Q5TDH0 399 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TSPO2Q5TGU0 170 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 PGBD2Q6P3X8 592 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TNFAIP8L2Q6P589 184 aaPredicted RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 PLET1Q6UQ28 207 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 DOK3Q7L591 496 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 AAED1Q7RTV5 226 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 GPAT4Q86UL3 456 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 GLCCI1Q86VQ1 547 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ELMOD2Q8IZ81 293 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TEX29Q8N6K0 151 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 WDR31Q8NA23 367 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 DUSP18Q8NEJ0 188 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 OR4F15Q8NGB8 312 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ENKURQ8TC29 256 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 NEU4Q8WWR8 484 aaPredicted RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 CREB3L1Q96BA8 519 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 DNAJA3Q96EY1 480 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TMEM80Q96HE8 168 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ARL5BQ96KC2 179 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 OPALINQ96PE5 141 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 MGLLQ99685 303 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 SF3B5Q9BWJ5 86 aaKnown RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 MND1Q9BWT6 205 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 OR11A1Q9GZK7 315 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 OR51E2Q9H255 320 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 OR51I1Q9H343 314 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 SERHL2Q9H4I8 314 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 RANBP3Q9H6Z4 567 aaPredicted RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF442Q9H7R0 627 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 RNF121Q9H920 327 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 AMBNQ9NP70 447 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC7A10Q9NS82 523 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 RHCGQ9UBD6 479 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 KCNE3Q9Y6H6 103 aa4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 CHD3Q12873 2000 aaKnown RBP4.97□□□□□ -1.61
CACNA1C-229ENST00000496818 TMED7-TICAM2A0A0A6YYA0 188 aa4.96□□□□□ -1.62
CACNA1C-229ENST00000496818 ARPC4-TTLL3A0A0A6YYG9 625 aa4.96□□□□□ -1.62
CACNA1C-229ENST00000496818 IGHV1-18A0A0C4DH31 117 aa4.96□□□□□ -1.62
CACNA1C-229ENST00000496818 A0A0G2JPF8 293 aa4.96□□□□□ -1.62
CACNA1C-229ENST00000496818 LOC100506127A0A0U1RQW1 187 aa4.96□□□□□ -1.62
CACNA1C-229ENST00000496818 A0A1B0GVI7 797 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms