RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 PGAM5Q96HS1 289 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 AMELYQ99218 206 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 SMR3AQ99954 134 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 SLC30A2Q9BRI3 323 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 REPIN1Q9BWE0 567 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 GSX1Q9H4S2 264 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 ZNF275Q9NSD4 429 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 TMEM100Q9NV29 134 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 DNAJC27Q9NZQ0 273 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 ZNF391Q9UJN7 358 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.36■□□□□ 0.217e-9■□□□□ 10.4
CTDSP1-213ENST00000496785 GMPPBQ9Y5P6 360 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 ACANP16112 2415 aa16.36■□□□□ 0.21
CTDSP1-213ENST00000496785 CLDN25C9JDP6 229 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 LYNX1G3V0Z9 82 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 MPZL2O60487 215 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 RP2O75695 350 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 TACSTD2P09758 323 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 LYNX1P0DP58 116 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 COL8A2P25067 703 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 DCTDP32321 178 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 ATP6V1E1P36543 226 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 GZMKP49863 264 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 ZNF121P58317 390 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 PSMA6P60900 246 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 ROM1Q03395 351 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 SNCBQ16143 134 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 TMEM249Q2WGJ8 235 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 GLYATL3Q5SZD4 288 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 LRRN1Q6UXK5 716 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 Q6ZR03 302 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 BCDIN3DQ7Z5W3 292 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 PEG10Q86TG7 708 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 SLC35F2Q8IXU6 374 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 BHLHE23Q8NDY6 225 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 YIPF5Q969M3 257 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 SPSB4Q96A44 273 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 CLN6Q9NWW5 311 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 N6AMT1Q9Y5N5 214 aa16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 CHD3Q12873 2000 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-213ENST00000496785 ACOD1A6NK06 481 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 CD300LBA8K4G0 201 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 IFNL4K9M1U5 179 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 PPIHO43447 177 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 CDC14BO60729 498 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 SBK2P0C263 348 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 ANPEPP15144 967 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 SRP9P49458 86 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 RIDAP52758 137 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 SNRPGP62308 76 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 ZNF92Q03936 586 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 RCN1Q15293 331 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 TRIP10Q15642 601 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 ZNF829Q3KNS6 432 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 SLC25A30Q5SVS4 291 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 FAM57BQ71RH2 274 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 ZNF679Q8IYX0 411 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 PACRGLQ8N7B6 248 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 OR51G2Q8NGK0 314 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 OR2AE1Q8NHA4 323 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 HPS1Q92902 700 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 RAB1CQ92928 201 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 ITFG2Q969R8 447 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 OR8B4Q96RC9 309 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 SLC29A1Q99808 456 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 ADGRL4Q9HBW9 690 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 SMPD3Q9NY59 655 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 IKZF2Q9UKS7 526 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 KLHDC2Q9Y2U9 406 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 LRP12Q9Y561 859 aa16.34■□□□□ 0.21
CTDSP1-213ENST00000496785 IGHV4-61A0A0C4DH41 118 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 CD5LO43866 347 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 OR2T7P0C7T2 308 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 KLBQ86Z14 1044 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 FTMTQ8N4E7 242 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 ZNF555Q8NEP9 628 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 OR2T27Q8NH04 317 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 CCL17Q92583 94 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 OR2V2Q96R30 315 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 MBOAT4Q96T53 435 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 BRD7Q9NPI1 651 aa16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 MRPL15Q9P015 296 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-213ENST00000496785 A0A1B0GWJ7 208 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 GMDSO60547 372 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 CXCR4P61073 352 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 EGR3Q06889 387 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 MZT1Q08AG7 82 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 OCLNQ16625 522 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 CYB5R2Q6BCY4 276 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 ZNF322Q6U7Q0 402 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 PRSS45Q7RTY3 260 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 CELF2-AS1Q8N7Q2 184 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 SPERTQ8NA61 448 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 ITLN1Q8WWA0 313 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 REEP6Q96HR9 211 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 Q96MT0 163 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 TEP1Q99973 2627 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 MOB1AQ9H8S9 216 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 PPP1R3CQ9UQK1 317 aa16.32■□□□□ 0.2
CTDSP1-213ENST00000496785 CR1P17927 2039 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms