RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ZNF879B4DU55 563 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 RAD51DO75771 328 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 IL2RAP01589 272 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 MMP7P09237 267 aaPredicted RBP14.75□□□□□ -0.05
LMNA-216ENST00000496738 GALP22466 123 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 MMP16P51512 607 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 PABPC1L2AQ5JQF8 200 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 FAM57BQ71RH2 274 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 DACT3Q96B18 629 aaPredicted RBP14.75□□□□□ -0.05
LMNA-216ENST00000496738 STARD4Q96DR4 205 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 KCNJ15Q99712 375 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 SPOCK3Q9BQ16 436 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 KCNS3Q9BQ31 491 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 BARHL1Q9BZE3 327 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 AKIP1Q9NQ31 210 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 A0A1W2PR80 420 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 SYNGR3O43761 229 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 PTGER4P35408 488 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 HTR5AP47898 357 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 PCBD1P61457 104 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 HNRNPA0Q13151 305 aaKnown RBP14.75□□□□□ -0.05
LMNA-216ENST00000496738 RSPO1Q2MKA7 263 aaPredicted RBP14.75□□□□□ -0.05
LMNA-216ENST00000496738 ZNF610Q8N9Z0 462 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 OR1F12Q8NHA8 337 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 USB1Q9BQ65 265 aaKnown RBP14.75□□□□□ -0.05
LMNA-216ENST00000496738 ZNF319Q9P2F9 582 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 PROCRQ9UNN8 238 aa14.75□□□□□ -0.05
LMNA-216ENST00000496738 LOC107986453A0A1B0GWG9 222 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 PIN1P1O15428 100 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 TTRP02766 147 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 ATF4P18848 351 aaPredicted RBP14.74□□□□□ -0.05
LMNA-216ENST00000496738 ZNF404Q494X3 552 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 SLC36A2Q495M3 483 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 NRN1LQ496H8 165 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 Q499Y3 187 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 RHOUQ7L0Q8 258 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 CITED4Q96RK1 184 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 HDHD2Q9H0R4 259 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 TLN1Q9Y490 2541 aaKnown RBP14.74□□□□□ -0.05
LMNA-216ENST00000496738 E9PLN8 166 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 LMX1BO60663 402 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 GLI4P10075 376 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 DCTDP32321 178 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 HGFACQ04756 655 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 LINC00299Q6ZSB3 139 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 ZNF627Q7L945 461 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 COMMD2Q86X83 199 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 CPEB3Q8NE35 698 aaKnown RBP14.74□□□□□ -0.05
LMNA-216ENST00000496738 OR8B12Q8NGG6 310 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 GPR148Q8TDV2 347 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 DERL3Q96Q80 235 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 TMEM246Q9BRR3 403 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 NIPAL2Q9H841 368 aa14.74□□□□□ -0.05
LMNA-216ENST00000496738 CCDC59Q9P031 241 aaKnown RBP14.74□□□□□ -0.05
LMNA-216ENST00000496738 M0R135 149 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 IL1AP01583 271 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 MYL9P24844 172 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 OR10A3P58181 314 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 PMPCAQ10713 525 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 HSD17B12Q53GQ0 312 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 RSBN1Q5VWQ0 802 aaPredicted RBP14.73□□□□□ -0.05
LMNA-216ENST00000496738 ANKRD16Q6P6B7 361 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 Q6ZT83 130 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 LUZP2Q86TE4 346 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 NR2C2APQ86WQ0 139 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 OR6Q1Q8NGQ2 317 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 BCL2L2Q92843 193 aaPredicted RBP14.73□□□□□ -0.05
LMNA-216ENST00000496738 ZNF799Q96GE5 643 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 SOX7Q9BT81 388 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 C6orf62Q9GZU0 229 aaPredicted RBP14.73□□□□□ -0.05
LMNA-216ENST00000496738 TRBV5-5A0A0J9YX44 114 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 CIB4A0PJX0 185 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 FAM25AB3EWG3 89 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 FAM25CB3EWG5 89 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 FAM25GB3EWG6 89 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 TBX1O43435 398 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 GATBO75879 557 aaKnown RBP14.73□□□□□ -0.05
LMNA-216ENST00000496738 CGAP01215 116 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 UCHL1P09936 223 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 ACSM4P0C7M7 580 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 SOX6P35712 828 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 TBRG1Q3YBR2 411 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 PCSK4Q6UW60 755 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 UNQ9370/PRO34162Q6UXP9 181 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 OR51E1Q8TCB6 317 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 SPTSSAQ969W0 71 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 TMEM106AQ96A25 262 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 SLC25A46Q96AG3 418 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 PLSCR4Q9NRQ2 329 aa14.73□□□□□ -0.05
LMNA-216ENST00000496738 ITPR1Q14643 2758 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 OR6C6A6NF89 314 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 CCL2P13500 99 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 CRYGSP22914 178 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 APEX1P27695 318 aaKnown RBP14.72□□□□□ -0.05
LMNA-216ENST00000496738 TIMP3P35625 211 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 S100ZQ8WXG8 99 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 PGAM5Q96HS1 289 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 NUFIP1Q9UHK0 495 aaKnown RBP14.72□□□□□ -0.05
LMNA-216ENST00000496738 DHDHQ9UQ10 334 aa14.72□□□□□ -0.05
LMNA-216ENST00000496738 ZNF835Q9Y2P0 537 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms