RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 MCIDASD6RGH6 385 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 KPNA4O00629 521 aaPredicted RBP6.89□□□□□ -1.31
GARNL3-219ENST00000495172 SAP30O75446 220 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 BCHEP06276 602 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 GGT2P36268 569 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 SERPINB5P36952 375 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 CDKN2CP42773 168 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 ENTPD1P49961 510 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 ZNF133P52736 654 aaPredicted RBP6.89□□□□□ -1.31
GARNL3-219ENST00000495172 CD47Q08722 323 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 RNF220Q5VTB9 566 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 FRMD7Q6ZUT3 714 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 PIGWQ7Z7B1 504 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 C11orf53Q8IXP5 236 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 CELF2-AS1Q8N7Q2 184 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 BBS10Q8TAM1 723 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 SEPHS2Q99611 448 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 SLC25A33Q9BSK2 321 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 ADAT1Q9BUB4 502 aaKnown RBP6.89□□□□□ -1.31
GARNL3-219ENST00000495172 ZFP57Q9NU63 452 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 SLC25A10Q9UBX3 287 aaPredicted RBP6.89□□□□□ -1.31
GARNL3-219ENST00000495172 DNAJC15Q9Y5T4 150 aa6.89□□□□□ -1.31
GARNL3-219ENST00000495172 LINC01548A6NM66 108 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 FAM90A22PA8MWA6 464 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 BLOC1S5-TXNDC5H3BN57 136 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 SGCEO43556 437 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 TPST2O60704 377 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 BGNP21810 368 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 RPL3P39023 403 aaKnown RBP6.88□□□□□ -1.31
GARNL3-219ENST00000495172 SEC23BQ15437 767 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 MICBQ29980 383 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 STUMQ69YW2 141 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 LGALS9CQ6DKI2 356 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 CEMP1Q6PRD7 247 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-219ENST00000495172 SLC36A1Q7Z2H8 476 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 NAA40Q86UY6 237 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 Q8N1X5 172 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 LNX2Q8N448 690 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 OR8U1Q8NH10 309 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 AGR3Q8TD06 166 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.88□□□□□ -1.31
GARNL3-219ENST00000495172 TMED5Q9Y3A6 229 aa6.88□□□□□ -1.31
GARNL3-219ENST00000495172 ODF3BA8MYP8 253 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 TMEM114B3SHH9 223 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 AZIN1O14977 448 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 EIF3HO15372 352 aaKnown RBP eCLIP6.87□□□□□ -1.31
GARNL3-219ENST00000495172 XRCC3O43542 346 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 IGF1P05019 195 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 NEFHP12036 1026 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 ARSBP15848 533 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 UGT2B15P54855 530 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 CDH12P55289 794 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 DYNC1I2Q13409 638 aaKnown RBP6.87□□□□□ -1.31
GARNL3-219ENST00000495172 TOP3AQ13472 1001 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-219ENST00000495172 GK2Q14410 553 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-219ENST00000495172 KIR2DS1Q14954 304 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 ZNF74Q16587 644 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 FAM91A1Q658Y4 838 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 GPR139Q6DWJ6 353 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 C5orf46Q6UWT4 87 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 CATSPERDQ86XM0 798 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 ZNRF1Q8ND25 227 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 OR4M1Q8NGD0 313 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 MOSPD2Q8NHP6 518 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 DCUN1D4Q92564 292 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 SLCO4A1Q96BD0 722 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 RASD2Q96D21 266 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 EPYCQ99645 322 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 PITX2Q99697 317 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 TMED9Q9BVK6 235 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 HEXA-AS1Q9H8Q6 139 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 C12orf10Q9HB07 376 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 EMCNQ9ULC0 261 aa6.87□□□□□ -1.31
GARNL3-219ENST00000495172 FAT1Q14517 4588 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 NUPR2A6NF83 97 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 C12orf77C9JDV5 145 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 H7C1C5 153 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 RTL8CO15255 209 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 TPST1O60507 370 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 GLCEO94923 617 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 PTBP3O95758 552 aaKnown RBP6.86□□□□□ -1.31
GARNL3-219ENST00000495172 PRPS1L1P21108 318 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 TUBG1P23258 451 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 ECHS1P30084 290 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 MAP2K3P46734 347 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 PLTPP55058 493 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 PCBD1P61457 104 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 LCN6P62502 163 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 RPL18Q07020 188 aaKnown RBP6.86□□□□□ -1.31
GARNL3-219ENST00000495172 TRAP1Q12931 704 aaKnown RBP6.86□□□□□ -1.31
GARNL3-219ENST00000495172 ZNF273Q14593 569 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 OR1Q1Q15612 314 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 CCDC92Q53HC0 331 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-219ENST00000495172 C6orf136Q5SQH8 315 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 ARMC4Q5T2S8 1044 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 KANK2Q63ZY3 851 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 PLBD1Q6P4A8 553 aa6.86□□□□□ -1.31
GARNL3-219ENST00000495172 DHDDSQ86SQ9 333 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms