RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 NRG4Q8WWG1 115 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 CYGBQ8WWM9 190 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 FAM168AQ92567 244 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 SGK3Q96BR1 496 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 RNFT2Q96EX2 444 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 TBX5Q99593 518 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 APOL4Q9BPW4 351 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 RHNO1Q9BSD3 238 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 SP140LQ9H930 580 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 MYOZ1Q9NP98 299 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 BRD7Q9NPI1 651 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 DLL4Q9NR61 685 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 A0A1W2PQL4 384 aaPredicted RBP11.52□□□□□ -0.57
COL1A1-208ENST00000494334 SNTNA6NMZ2 147 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 LYNX1G3V0Z9 82 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 H7C1Q1 480 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 XRCC2O43543 280 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 LILRA1O75019 489 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF254O75437 659 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 ADH4P08319 380 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 CSF3P09919 207 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 LYNX1P0DP58 116 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 SELEP16581 610 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 COL8A2P25067 703 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 DCTDP32321 178 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 IL5RAQ01344 420 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 EGR3Q06889 387 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 CDK5R2Q13319 367 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 ZMAT1Q5H9K5 638 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 FAM209AQ5JX71 171 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 MRPL21Q7Z2W9 205 aaKnown RBP11.52□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF786Q8N393 782 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 OR10H4Q8NGA5 316 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 OR52H1Q8NGJ2 320 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 SPSB4Q96A44 273 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 Q96MT0 163 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 DIRC2Q96SL1 478 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 ADI1Q9BV57 179 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 AMBNQ9NP70 447 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 IKZF2Q9UKS7 526 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 ZDHHC8Q9ULC8 765 aa11.52□□□□□ -0.57
COL1A1-208ENST00000494334 LOC390937A0A1W2PQ73 354 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 CD300LBA8K4G0 201 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 RNF223E7ERA6 249 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 J3QRE1 110 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
COL1A1-208ENST00000494334 CD55P08174 381 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 RIDAP52758 137 aaKnown RBP11.51□□□□□ -0.57
COL1A1-208ENST00000494334 PSMA6P60900 246 aaKnown RBP11.51□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF91Q05481 1191 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 CARTPTQ16568 116 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 SPRNQ5BIV9 151 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 BHLHE23Q8NDY6 225 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 OR2Z1Q8NG97 314 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 RDH5Q92781 318 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 YIPF5Q969M3 257 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 LGALS12Q96DT0 336 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 REEP6Q96HR9 211 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 PGAM5Q96HS1 289 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 C18orf12Q96KH6 178 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 SLC30A2Q9BRI3 323 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 REG4Q9BYZ8 158 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 OR10A2Q9H208 303 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 VCXQ9H320 206 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 DECR2Q9NUI1 292 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 FAM206AQ9NX38 181 aa11.51□□□□□ -0.57
COL1A1-208ENST00000494334 MRM2Q9UI43 246 aaKnown RBP11.51□□□□□ -0.57
COL1A1-208ENST00000494334 EXOGQ9Y2C4 368 aaKnown RBP11.51□□□□□ -0.57
COL1A1-208ENST00000494334 TMEM269A0A1B0GVZ9 245 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 GGT3PA6NGU5 568 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 VWC2LB2RUY7 222 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 H0YAE9 185 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 H0YL77 283 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 NDUFS8O00217 210 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 TPD52L2O43399 206 aaKnown RBP11.5□□□□□ -0.57
COL1A1-208ENST00000494334 SRSF10O75494 262 aaKnown RBP11.5□□□□□ -0.57
COL1A1-208ENST00000494334 PNPP00491 289 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 DBTP11182 482 aaKnown RBP11.5□□□□□ -0.57
COL1A1-208ENST00000494334 SLC25A16P16260 332 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 CAPGP40121 348 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 MMP16P51512 607 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 ISL1P61371 349 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 MRPS11P82912 194 aaKnown RBP11.5□□□□□ -0.57
COL1A1-208ENST00000494334 TNFAIP6P98066 277 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-208ENST00000494334 FAM3AP98173 230 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF85Q03923 595 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 RIPK1Q13546 671 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 SMN1Q16637 294 aaKnown RBP11.5□□□□□ -0.57
COL1A1-208ENST00000494334 TIGD6Q17RP2 521 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF684Q5T5D7 378 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 PLEKHG7Q6ZR37 379 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 OR8B12Q8NGG6 310 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 OR13G1Q8NGZ3 307 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 SPRYD4Q8WW59 207 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-208ENST00000494334 PPP1R14AQ96A00 147 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 ELMOD3Q96FG2 381 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 COX4I2Q96KJ9 171 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms