RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SDHBP21912 280 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 THBS4P35443 961 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 GUCA1AP43080 201 aaPredicted RBP9.34□□□□□ -0.91
CLCN6-208ENST00000494028 AP3S2P59780 193 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 SCRN3Q0VDG4 424 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 RSPO1Q2MKA7 263 aaPredicted RBP9.34□□□□□ -0.91
CLCN6-208ENST00000494028 GFOD2Q3B7J2 385 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 PLXDC2Q6UX71 529 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 LUZP2Q86TE4 346 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 SLC22A24Q8N4F4 322 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 SSC4DQ8WTU2 575 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 FCAMRQ8WWV6 532 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 FOXRED1Q96CU9 486 aaPredicted RBP9.34□□□□□ -0.91
CLCN6-208ENST00000494028 SORCS2Q96PQ0 1159 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 UQCC2Q9BRT2 126 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 LINC00470Q9BZP3 86 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 SLCO5A1Q9H2Y9 848 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF552Q9H707 407 aaPredicted RBP9.34□□□□□ -0.91
CLCN6-208ENST00000494028 CNTD2Q9H8S5 307 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 PLEK2Q9NYT0 353 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 MRPL15Q9P015 296 aaKnown RBP9.34□□□□□ -0.91
CLCN6-208ENST00000494028 V9GYS6 101 aa9.34□□□□□ -0.91
CLCN6-208ENST00000494028 TNRC6AQ8NDV7 1962 aaKnown RBP9.33□□□□□ -0.92
CLCN6-208ENST00000494028 KNTC1P50748 2209 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 NAP1L6A6NFF2 107 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 A6NL46 340 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 H7C417 338 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 NKX2-8O15522 239 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 SGCEO43556 437 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 SYNGR3O43761 229 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 GMDSO60547 372 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 SYNGR4O95473 234 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 BPNT1O95861 308 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 TCRBP04435 133 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF32P17041 273 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 GIFP27352 417 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 CCR6P51684 374 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 CAPZA1P52907 286 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 RAB25P57735 213 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 RRAS2P62070 204 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-208ENST00000494028 PPIAP62937 165 aaKnown RBP9.33□□□□□ -0.92
CLCN6-208ENST00000494028 ARG2P78540 354 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 QRFPP83859 136 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 GALK2Q01415 458 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 SRYQ05066 204 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 PMPCAQ10713 525 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 UNC119Q13432 240 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 STK11Q15831 433 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 BCL2A1Q16548 175 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF766Q5HY98 468 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 TSPO2Q5TGU0 170 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF774Q6NX45 483 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 BTN2A1Q7KYR7 527 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 RNF144BQ7Z419 303 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 TMEM178AQ8NBL3 297 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 SPTSSAQ969W0 71 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 PTX4Q96A99 478 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 C1orf147Q96MC9 270 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-208ENST00000494028 WNT5BQ9H1J7 359 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 C20orf85Q9H1P6 137 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 ATG5Q9H1Y0 275 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 EXO5Q9H790 373 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 ACKR4Q9NPB9 350 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 EMC3Q9P0I2 261 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 COPZ2Q9P299 210 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 SPRR3Q9UBC9 169 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 FBLN5Q9UBX5 448 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 KLK11Q9UBX7 282 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 MTFP1Q9UDX5 166 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 MCTS1Q9ULC4 181 aaKnown RBP9.33□□□□□ -0.92
CLCN6-208ENST00000494028 NOSIPQ9Y314 301 aaKnown RBP9.33□□□□□ -0.92
CLCN6-208ENST00000494028 N6AMT1Q9Y5N5 214 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 CSAG2Q9Y5P2 127 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF407Q9C0G0 2248 aa9.33□□□□□ -0.92
CLCN6-208ENST00000494028 TRAV6A0A075B6T7 132 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 TRAV18A0A075B6X5 111 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 A0A0A6YYH2 397 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 IGKV1-9A0A0C4DH69 117 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 A6NJ64 397 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 F5H5K5 113 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 KLRC4-KLRK1H3BQV0 150 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 DHRS3O75911 302 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 ACTL6AO96019 429 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 APOC1P02654 83 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 ERCC1P07992 297 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 MMP7P09237 267 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 VSIG8P0DPA2 414 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 PRF1P14222 555 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 OR3A4PP47883 348 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 HTR5AP47898 357 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 SLC6A9P48067 706 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 NKX2-5P52952 324 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-208ENST00000494028 PMP22Q01453 160 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 SNAI3Q3KNW1 292 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 MOGAT2Q3SYC2 334 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 NRN1LQ496H8 165 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 RNFT1Q5M7Z0 435 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 OR10K2Q6IF99 312 aa9.32□□□□□ -0.92
CLCN6-208ENST00000494028 FAAP20Q6NZ36 180 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms