RNA–Protein interactions for RNA: ENST00000493947.5

ZNF655-223, Transcript of zinc finger protein 655, human

TSL 4

Gene ZNF655, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF655-223	ENST00000493947	KCNG2	Q9UJ96	466 aa		13.8	□□□□□ -0.2
ZNF655-223	ENST00000493947	CD300LB	A8K4G0	201 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947		M0R135	149 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	BHLHE40	O14503	412 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	HOXA3	O43365	443 aa	Predicted RBP	13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	OR10H3	O60404	316 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	MMP9	P14780	707 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	CA6	P23280	308 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	RRM2	P31350	389 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	MSX2	P35548	267 aa	Predicted RBP	13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	2e-6	■□□□□ 9.5
ZNF655-223	ENST00000493947	MALL	Q13021	153 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	SLC35F1	Q5T1Q4	408 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	C16orf87	Q6PH81	154 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	PGAP1	Q75T13	922 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	OR2AE1	Q8NHA4	323 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	TMIGD2	Q96BF3	282 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	ZNF799	Q96GE5	643 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	ELAC2	Q9BQ52	826 aa	Known RBP	13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	EGLN3	Q9H6Z9	239 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	IL1RAP	Q9NPH3	570 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	MMP24	Q9Y5R2	645 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	NOTCH1	P46531	2555 aa		13.79	□□□□□ -0.2
ZNF655-223	ENST00000493947	ARPC2	O15144	300 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	HLA-DQA2	P01906	255 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	SFTPB	P07988	381 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	IRF2	P14316	349 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	NOS3	P29474	1203 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	PYCR1	P32322	319 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	HMGA2	P52926	109 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	TPTE	P56180	551 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	PCK2	Q16822	640 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	MRPL21	Q7Z2W9	205 aa	Known RBP	13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	CYB561A3	Q8NBI2	242 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	OR8D4	Q8NGM9	314 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	OR11L1	Q8NGX0	322 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	BTBD10	Q9BSF8	475 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	ADAT1	Q9BUB4	502 aa	Known RBP	13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	SMURF1	Q9HCE7	757 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	RNF7	Q9UBF6	113 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	MAGEL2	Q9UJ55	1249 aa		13.78	□□□□□ -0.2
ZNF655-223	ENST00000493947	SRRM5	B3KS81	715 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	ENSA	O43768	121 aa	Known RBP	13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	GMDS	O60547	372 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	FABP3	P05413	133 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	OMG	P23515	440 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	CFHR2	P36980	270 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	BPIFB3	P59826	476 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	RELB	Q01201	579 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	OR8G1	Q15617	311 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	GLYATL3	Q5SZD4	288 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	RUSC1-AS1	Q66K80	236 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	TREML4	Q6UXN2	200 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947		Q6YL49	198 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	SPATC1	Q76KD6	591 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	PLPP7	Q8NBV4	271 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	GNPDA2	Q8TDQ7	276 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	SPTSSA	Q969W0	71 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	TBX15	Q96SF7	602 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	SLC22A4	Q9H015	551 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	NSRP1	Q9H0G5	558 aa	Known RBP	13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	MED4	Q9NPJ6	270 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	IL20	Q9NYY1	176 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	LYVE1	Q9Y5Y7	322 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	CDH10	Q9Y6N8	788 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	COMMD3-BMI1	R4GMX3	469 aa		13.77	□□□□□ -0.21
ZNF655-223	ENST00000493947	FAM181B	A6NEQ2	426 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	TVP23A	A6NH52	213 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	LGALS8	O00214	317 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	SNX3	O60493	162 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	GMNN	O75496	209 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	IFNGR2	P38484	337 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	NPY4R	P50391	375 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	GPR157	Q5UAW9	335 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	DRAM2	Q6UX65	266 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	PGAM4	Q8N0Y7	254 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	GCSAM	Q8N6F7	178 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	OR9Q2	Q8NGE9	314 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	OR51L1	Q8NGJ5	315 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	OR4C15	Q8NGM1	316 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	NSMCE2	Q96MF7	247 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	NMNAT2	Q9BZQ4	307 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	SIRPD	Q9H106	197 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	FN3KRP	Q9HA64	309 aa		13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	MRPL15	Q9P015	296 aa	Known RBP	13.76	□□□□□ -0.21
ZNF655-223	ENST00000493947	CENPVL3	A0A0U1RRI6	287 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	ZNF879	B4DU55	563 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	C3orf80	F5H4A9	247 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	LHB	P01229	141 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	ZNF823	P16415	610 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	SRSF4	Q08170	494 aa	Known RBP	13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	HSP90B2P	Q58FF3	399 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	SAMD4B	Q5PRF9	694 aa	Known RBP	13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	ZNF826P	Q6ZT77	177 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	DCXR	Q7Z4W1	244 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	FAM90A1	Q86YD7	464 aa		13.75	□□□□□ -0.21
ZNF655-223	ENST00000493947	ZDHHC21	Q8IVQ6	265 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms