RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 J3QLW9 94 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 J3QW42 95 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 SLC1A7O00341 560 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 SRSF10O75494 262 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 IGHV3-13P01766 116 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 APOC1P02654 83 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 LIMS3P0CW19 117 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 LIMS4P0CW20 117 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF19P17023 458 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 GALEQ14376 348 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 NKPD1Q17RQ9 610 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 CDONQ4KMG0 1287 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 FBXW12Q6X9E4 464 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 C1orf174Q8IYL3 243 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF540Q8NDQ6 660 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 BHLHE23Q8NDY6 225 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 SGK3Q96BR1 496 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 PERPQ96FX8 193 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 C4orf36Q96KX1 117 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 VRK1Q99986 396 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 TPK1Q9H3S4 243 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 CXorf56Q9H5V9 222 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 DYNLRB1Q9NP97 96 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 PLCXD1Q9NUJ7 323 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 UBAP1Q9NZ09 502 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 CLEC2DQ9UHP7 191 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 EDARQ9UNE0 448 aa15.29■□□□□ 0.04
PDLIM7-208ENST00000493815 TIMM8AO60220 97 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 LILRA1O75019 489 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 SULT1C4O75897 302 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 DCKP27707 260 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 TIGD6Q17RP2 521 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF829Q3KNS6 432 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 MRPL21Q7Z2W9 205 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 RORBQ92753 470 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 HAVCR1Q96D42 359 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 TMEM80Q96HE8 168 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 SIGLEC11Q96RL6 698 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 SOX7Q9BT81 388 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 PBOV1Q9GZY1 135 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 OR10A2Q9H208 303 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 RASSF4Q9H2L5 321 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 PAK1IP1Q9NWT1 392 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 PURGQ9UJV8 347 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 R4GMQ9 66 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 EFCAB10A6NFE3 127 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 LOC110117498-PIK3R3F6TDL0 507 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 M0R233 179 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 RAC2P15153 192 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 C21orf33P30042 268 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 DCTDP32321 178 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 EVX1P49640 407 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 ODF4Q2M2E3 257 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 DEFB113Q30KQ7 82 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 PGAP1Q75T13 922 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 FAM220AQ7Z4H9 259 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF786Q8N393 782 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 OR52H1Q8NGJ2 320 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 RNF166Q96A37 237 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 REEP6Q96HR9 211 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 MSL2Q9HCI7 577 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 G6PC2Q9NQR9 355 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 DIMT1Q9UNQ2 313 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 SLC22A13Q9Y226 551 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 PMF1-BGLAPU3KQ54 211 aa15.28■□□□□ 0.04
PDLIM7-208ENST00000493815 MAP1AP78559 2803 aaPredicted RBP15.27■□□□□ 0.04
PDLIM7-208ENST00000493815 ARFGEF3Q5TH69 2177 aa15.27■□□□□ 0.04
PDLIM7-208ENST00000493815 LY6HO94772 140 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 PIPP12273 146 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 TUBG1P23258 451 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 MMP15P51511 669 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 MMP16P51512 607 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 OR2G6Q5TZ20 316 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 STX19Q8N4C7 294 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 PELI1Q96FA3 418 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 LYZL4Q96KX0 146 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 REPIN1Q9BWE0 567 aaKnown RBP15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 TEX15Q9BXT5 2789 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 Q9H521 79 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 TUBG2Q9NRH3 451 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 INPP5EQ9NRR6 644 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 FKBP14Q9NWM8 211 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 CNOT2Q9NZN8 540 aaKnown RBP15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 OR52A1Q9UKL2 312 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 ITGB1BP2Q9UKP3 347 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 CCDC168Q8NDH2 2452 aa15.27■□□□□ 0.03
PDLIM7-208ENST00000493815 AKAP9Q99996 3911 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 IRGMA1A4Y4 181 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 ZSCAN5BA6NJL1 495 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 H3BSA7 217 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 H3BSH0 61 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 DENRO43583 198 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 BMP4P12644 408 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 MYL12AP19105 171 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 ACTA2P62736 377 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 ACTG2P63267 376 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 BCL2L15Q5TBC7 163 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 OR51E1Q8TCB6 317 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 NINJ1Q92982 152 aa15.26■□□□□ 0.03
PDLIM7-208ENST00000493815 SORCS2Q96PQ0 1159 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms