RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 NSUN5P1Q3KNT7 163 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 NCR3LG1Q68D85 454 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 PGAP1Q75T13 922 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 CROCCP2Q86T23 111 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 MICU2Q8IYU8 434 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 Q8N7P7 452 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 WFDC9Q8NEX5 89 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 OR10A6Q8NH74 314 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 C8orf46Q8TAG6 207 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 SPRYD4Q8WW59 207 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 R3HDM4Q96D70 268 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 CLPTM1LQ96KA5 538 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 PRRC1Q96M27 445 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 OCSTAMPQ9BR26 566 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 FAM234AQ9H0X4 552 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 SYT4Q9H2B2 425 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 C1orf123Q9NWV4 160 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 VSX1Q9NZR4 365 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 COA3Q9Y2R0 106 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 POLR1DQ9Y2S0 133 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 LHFPL6Q9Y693 200 aa11.63□□□□□ -0.55
PRPF40A-211ENST00000493468 EFCAB9A8MZ26 197 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 SHOX2O60902 331 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 MUC1P15941 1255 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 CA6P23280 308 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 IFNA8P32881 189 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 RPL4P36578 427 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 IDH3AP50213 366 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 KRR1Q13601 381 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 OTPQ5XKR4 325 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 WDR93Q6P2C0 686 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 NRMQ8IXM6 262 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 PAPD5Q8NDF8 572 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 OR13C2Q8NGS9 318 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 ACOT11Q8WXI4 607 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 SLCO4A1Q96BD0 722 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 NDEL1Q9GZM8 345 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 NPFFR1Q9GZQ6 430 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 RABEP2Q9H5N1 569 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 NMNAT1Q9HAN9 279 aaPredicted RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 MRPL15Q9P015 296 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 PRPF19Q9UMS4 504 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 A4GNTQ9UNA3 340 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 NDUFAF1Q9Y375 327 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 BIRC6Q9NR09 4857 aa11.62□□□□□ -0.55
PRPF40A-211ENST00000493468 CD300LBA8K4G0 201 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 SDHAP31040 664 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 OR1E2P47887 323 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 MZT1Q08AG7 82 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 ECH1Q13011 328 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 KLRD1Q13241 179 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 GPR139Q6DWJ6 353 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 SLC36A1Q7Z2H8 476 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 MRPL21Q7Z2W9 205 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 ADCK1Q86TW2 530 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 OFCC1Q8IZS5 231 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 LYG1Q8N1E2 194 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 SLC7A13Q8TCU3 470 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 WIPF2Q8TF74 440 aaPredicted RBP11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 C7orf26Q96N11 449 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 SSX3Q99909 188 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 EBF4Q9BQW3 602 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 DCTN5Q9BTE1 182 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 RPS6KA6Q9UK32 745 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 RYR2Q92736 4967 aa11.61□□□□□ -0.55
PRPF40A-211ENST00000493468 A0A1B0GW55 424 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 A0A1W2PRD5 423 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 A0A1W2PRF3 423 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 A0A1W2PRM7 423 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 M0R1W7 72 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 ANGPT2O15123 496 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 IFNA14P01570 189 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 DUX4L2P0CJ85 424 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 DUX4L3P0CJ86 424 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 DUX4L4P0CJ87 422 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 DUX4L5P0CJ88 424 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 DUX4L6P0CJ89 424 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 DUX4L7P0CJ90 424 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 ZNF26P17031 533 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 MICBQ29980 383 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 LRRC75BQ2VPJ9 315 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 ZBED5Q49AG3 693 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 ZNF826PQ6ZT77 177 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 RNF113BQ8IZP6 322 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 Q8N2B8 174 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 PNKDQ8N490 385 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 TSPEARQ8WU66 669 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 C12orf43Q96C57 262 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 GPX7Q96SL4 187 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 ATF6BQ99941 703 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 NUAK2Q9H093 628 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 MEGF9Q9H1U4 602 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 METTL8Q9H825 291 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 RNPEPL1Q9HAU8 725 aa11.6□□□□□ -0.55
PRPF40A-211ENST00000493468 NKIRAS1Q9NYS0 192 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms