RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 P2RY8Q86VZ1 359 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 RAB43Q86YS6 212 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 NPWQ8N729 165 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 LINC00469Q8N7U9 141 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 C20orf203Q8NBC4 194 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 FAM122AQ96E09 287 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 C16orf74Q96GX8 76 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 UBE2E2Q96LR5 201 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 ZFP3Q96NJ6 502 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 OSBPL11Q9BXB4 747 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 PARVGQ9HBI0 331 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 VNN3Q9NY84 501 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 CAMTA1Q9Y6Y1 1673 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 RNASEK-C17orf49H0YIS7 233 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 GOLGA8RI6L899 631 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 PEX7O00628 323 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 TOR1AO14656 332 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 TNFAIP8O95379 198 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 BRI3O95415 125 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 RD3LP0DJH9 198 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF30P17039 623 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 IGFBP3P17936 291 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-212ENST00000493341 PGAM1P18669 254 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 CD40LGP29965 261 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 GNRHRP30968 328 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 CAV2P51636 162 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 PPP1CBP62140 327 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 HNRNPA0Q13151 305 aaKnown RBP3.39□□□□□ -1.87
VPS13A-212ENST00000493341 TFDP3Q5H9I0 405 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 ACTL10Q5JWF8 245 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 AHSA2Q719I0 299 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 H2AFVQ71UI9 128 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 ABHD13Q7L211 337 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 MCOLN3Q8TDD5 553 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 SERPINB11Q96P15 392 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 TSNAXQ99598 290 aaKnown RBP3.39□□□□□ -1.87
VPS13A-212ENST00000493341 CTRCQ99895 268 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 TMBIM4Q9HC24 238 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 VAPAQ9P0L0 249 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 DEC1Q9P2X7 70 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF107Q9UII5 783 aaPredicted RBP3.39□□□□□ -1.87
VPS13A-212ENST00000493341 SLC22A14Q9Y267 594 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 KLF12Q9Y4X4 402 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 OR51B2Q9Y5P1 312 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 TNRQ92752 1358 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 ATP10BO94823 1461 aa3.39□□□□□ -1.87
VPS13A-212ENST00000493341 NUP153P49790 1475 aaKnown RBP3.39□□□□□ -1.87
VPS13A-212ENST00000493341 ARAP3Q8WWN8 1544 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 CFAP74Q9C0B2 1584 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 LRRIQ1Q96JM4 1722 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 FAM168BA1KXE4 195 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 SMIM10L1P0DMW3 83 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 ERGP11308 486 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 MYL9P24844 172 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 CDKN2BP42772 138 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 MAGEA6P43360 314 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 PPICP45877 212 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 TAS2R39P59534 338 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 RPS23P62266 143 aaKnown RBP3.38□□□□□ -1.87
VPS13A-212ENST00000493341 SLC7A9P82251 487 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 RPL18AQ02543 176 aaKnown RBP3.38□□□□□ -1.87
VPS13A-212ENST00000493341 PIGGQ5H8A4 983 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 PLET1Q6UQ28 207 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 TGIF2LYQ8IUE0 185 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 GPR26Q8NDV2 337 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 MRAPQ8TCY5 172 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 LRRC58Q96CX6 371 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 SMIM10Q96HG1 83 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 UBXN6Q9BZV1 441 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 SLIRPQ9GZT3 109 aaKnown RBP3.38□□□□□ -1.87
VPS13A-212ENST00000493341 GFRA4Q9GZZ7 299 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 HDHD2Q9H0R4 259 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 PLEKHA1Q9HB21 404 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 SIRT7Q9NRC8 400 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 EURLQ9NYK6 297 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 TMEM9Q9P0T7 183 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 SCML1Q9UN30 329 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 TRAPPC4Q9Y296 219 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 HECW1Q76N89 1606 aa3.38□□□□□ -1.87
VPS13A-212ENST00000493341 A0A0B4J2E0 115 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 EPOPA6NHQ4 379 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 F8VP50 259 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 KRTAP4-16G5E9R7 235 aaPredicted RBP3.37□□□□□ -1.87
VPS13A-212ENST00000493341 NPIPB7O75200 414 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 TDGF1P13385 188 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 HTR1EP28566 365 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 PFN2P35080 140 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 HCAR3P49019 387 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 TDGF1P3P51864 188 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 CACNG7P62955 275 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 SLAMF1Q13291 335 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 HERPUD1Q15011 391 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF630Q2M218 657 aaPredicted RBP3.37□□□□□ -1.87
VPS13A-212ENST00000493341 THEM4Q5T1C6 240 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 FAM27D1Q5T7N8 215 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF544Q6NX49 715 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 OR4S2Q8NH73 311 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 ADTRPQ96IZ2 230 aa3.37□□□□□ -1.87
VPS13A-212ENST00000493341 PLEKHG1Q9ULL1 1385 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms