RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 CRMP1Q14194 572 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 TAF13Q15543 124 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 OR8G1Q15617 311 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 SNAI3Q3KNW1 292 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 LYPD4Q6UWN0 246 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 NLRC3Q7RTR2 1065 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 DCXRQ7Z4W1 244 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 ZNRF4Q8WWF5 429 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 GCDHQ92947 438 aaPredicted RBP17.24■□□□□ 0.35
CLTA-208ENST00000493185 ARMC1Q9NVT9 282 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 VNN3Q9NY84 501 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 NUP50Q9UKX7 468 aa17.24■□□□□ 0.35
CLTA-208ENST00000493185 GGT3PA6NGU5 568 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 RIIAD1A6NNX1 92 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 CD300LBA8K4G0 201 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 FAM107AO95990 144 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 GYPBP06028 91 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 ZNF3P17036 446 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 OTX1P32242 354 aaPredicted RBP17.23■□□□□ 0.35
CLTA-208ENST00000493185 BLVRAP53004 296 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 MS4A2Q01362 244 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 MAB21L1Q13394 359 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 ZNF404Q494X3 552 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 RBMS3Q6XE24 437 aaKnown RBP17.23■□□□□ 0.35
CLTA-208ENST00000493185 KLBQ86Z14 1044 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 ZNF511Q8NB15 262 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 OR8B3Q8NGG8 313 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 OR6K6Q8NGW6 343 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 OR4Q3Q8NH05 313 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 CCDC124Q96CT7 223 aaKnown RBP17.23■□□□□ 0.35
CLTA-208ENST00000493185 NEIL1Q96FI4 390 aaPredicted RBP17.23■□□□□ 0.35
CLTA-208ENST00000493185 OR8B2Q96RD0 313 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 TMEM246Q9BRR3 403 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 CENPMQ9NSP4 180 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 PPIAL4AQ9Y536 164 aa17.23■□□□□ 0.35
CLTA-208ENST00000493185 ZNF593O00488 134 aaPredicted RBP17.22■□□□□ 0.35
CLTA-208ENST00000493185 RAP2AP10114 183 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 SPI1P17947 270 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 CA6P23280 308 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 PMELP40967 661 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 ZNF92Q03936 586 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 GK3PQ14409 553 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 BTNL3Q6UXE8 466 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 OR10G2Q8NGC3 310 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 OR2AE1Q8NHA4 323 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 TEX47Q8TBZ9 253 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 Q8TCH9 128 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 DVL3Q92997 716 aaPredicted RBP17.22■□□□□ 0.35
CLTA-208ENST00000493185 SLAMF6Q96DU3 332 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 ASB9Q96DX5 294 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 KCNJ15Q99712 375 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 ADAT1Q9BUB4 502 aaKnown RBP17.22■□□□□ 0.35
CLTA-208ENST00000493185 NMNAT2Q9BZQ4 307 aa17.22■□□□□ 0.35
CLTA-208ENST00000493185 ZNF878C9JN71 531 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 PSKH1P11801 424 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 PRKXP51817 358 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 PAX8Q06710 450 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 PCK2Q16822 640 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 TEX30Q5JUR7 227 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 FAM201AQ5SY85 155 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 GLYATL3Q5SZD4 288 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 LRRN1Q6UXK5 716 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 OPA3Q9H6K4 179 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 FN3KRPQ9HA64 309 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 ESM1Q9NQ30 184 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 UFSP2Q9NUQ7 469 aa17.21■□□□□ 0.35
CLTA-208ENST00000493185 TMEM89A2RUT3 159 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 GMDSO60547 372 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 FAM20BO75063 409 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 CLUP10909 449 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 CFPP27918 469 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 SLC15A1P46059 708 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 PITPNBP48739 271 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 COMPP49747 757 aaPredicted RBP17.2■□□□□ 0.34
CLTA-208ENST00000493185 GRB2P62993 217 aaKnown RBP17.2■□□□□ 0.34
CLTA-208ENST00000493185 PRAMEF6Q5VXH4 476 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 CD300LDQ6UXZ3 194 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 DCDC5Q6ZRR9 648 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 ZDHHC22Q8N966 263 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 GIPC3Q8TF64 312 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 NIPSNAP1Q9BPW8 284 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 CMC2Q9NRP2 79 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 MRPL15Q9P015 296 aaKnown RBP17.2■□□□□ 0.34
CLTA-208ENST00000493185 ZNF69Q9UC07 566 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 N6AMT1Q9Y5N5 214 aa17.2■□□□□ 0.34
CLTA-208ENST00000493185 IGHV2-70DA0A0C4DH43 119 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 H3BN98 237 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 XRCC2O43543 280 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 CST1P01037 141 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 T-ENOLP0DO92 83 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 SLC2A1P11166 492 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 CD80P33681 288 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 UBA52P62987 128 aaKnown RBP17.19■□□□□ 0.34
CLTA-208ENST00000493185 MPPED2Q15777 294 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 KCNJ8Q15842 424 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 KLF17Q5JT82 389 aaPredicted RBP17.19■□□□□ 0.34
CLTA-208ENST00000493185 SIGLECL1Q8N7X8 197 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 C3orf56Q8N813 242 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 SPERTQ8NA61 448 aa17.19■□□□□ 0.34
CLTA-208ENST00000493185 PLPP7Q8NBV4 271 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms