RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SPATA31E1Q6ZUB1 1445 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 PTPRJQ12913 1337 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 BCORL1Q5H9F3 1711 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 A0A087WX48 190 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 KIR2DS5A0A0G2JLQ3 304 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 A0A0G2JNG1 304 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 PRSS51A0A1B0GVH4 220 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 A0A1B0GW55 424 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 NKX2-6A6NCS4 301 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 CCDC182A6NF36 153 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ARL5CA6NH57 179 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 YJEFN3A6XGL0 299 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 SRRM4A7MD48 611 aaKnown RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 FAM157AC9JC47 383 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 E5RGE8 158 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 G3V4G9 280 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 GFYI3L273 518 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 CCL25O15444 150 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 MFSD11O43934 449 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 PRKNO60260 465 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 GNG7O60262 68 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 SNAP91O60641 907 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ATP5LO75964 103 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ATG12O94817 140 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 MT-CO3P00414 261 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 CATP04040 527 aaKnown RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 TACSTD2P09758 323 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUX4L2P0CJ85 424 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUX4L3P0CJ86 424 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUX4L5P0CJ88 424 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUX4L6P0CJ89 424 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUX4L7P0CJ90 424 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 MPC1LP0DKB6 136 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR13C7P0DN81 318 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 GATA1P15976 413 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 PCSK6P29122 969 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 PPIFP30405 207 aaKnown RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR3A2P47893 321 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 VAMP7P51809 220 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 XGP55808 180 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 BIDP55957 195 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 RPL26P61254 145 aaKnown RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 BAXQ07812 192 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 KIR2DS5Q14953 304 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 RBMS2Q15434 407 aaKnown RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 LTC4SQ16873 150 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUOXA1Q1HG43 343 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 TMEM52BQ4KMG9 183 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR4A47Q6IF82 309 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUX4L9Q6RFH8 374 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 PAMR1Q6UXH9 720 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 RAD9BQ6WBX8 426 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 TMEM184AQ6ZMB5 413 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 LANCL3Q6ZV70 420 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ANKRD37Q7Z713 158 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 C8orf59Q8N0T1 100 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF567Q8N184 647 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 MUC15Q8N387 334 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 RYBPQ8N488 228 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF614Q8N883 585 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF548Q8NEK5 533 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 SLC30A7Q8NEW0 376 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR11H4Q8NGC9 324 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR4C13Q8NGP0 309 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR13C6PQ8NH95 151 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 CRYGNQ8WXF5 182 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 APOBEC3DQ96AK3 386 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 REEP6Q96HR9 211 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DNAJC30Q96LL9 226 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 RBP7Q96R05 134 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 S1PR3Q99500 378 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 MARVELD1Q9BSK0 173 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 SUCNR1Q9BXA5 334 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 CHIAQ9BZP6 476 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR51I1Q9H343 314 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 FNDC4Q9H6D8 234 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 GOLGA2P5Q9HBQ8 144 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 TXNRD2Q9NNW7 524 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ELOVL5Q9NYP7 299 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DUX4Q9UBX2 424 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF230Q9UIE0 474 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-220ENST00000492859 FZR1Q9UM11 496 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 TP53TG1Q9Y2A0 90 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 NSG2Q9Y328 171 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 TMED3Q9Y3Q3 217 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 OR1A2Q9Y585 309 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 ETV7Q9Y603 341 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 RFNGQ9Y644 331 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 WSB1Q9Y6I7 421 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 MBD5Q9P267 1494 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 PLXND1Q9Y4D7 1925 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 GRIN2BQ13224 1484 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 SCO2A0A1W2PP80 73 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 A0A1W2PRE2 83 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 FAM231BA6NCW3 169 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 OR5H1A6NKK0 313 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 SYNGR1O43759 233 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 B4GALT3O60512 393 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 GRAP2O75791 330 aa3.66□□□□□ -1.82
BRCA1-220ENST00000492859 TOMM40O96008 361 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms