RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 BHLHE40O14503 412 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 PHYHO14832 338 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 SPRY1O43609 319 aaPredicted RBP10.42□□□□□ -0.74
COL6A1-205ENST00000492851 CCNB2O95067 398 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 PTBP3O95758 552 aaKnown RBP10.42□□□□□ -0.74
COL6A1-205ENST00000492851 IFNGP01579 166 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 HLA-DPB1P04440 258 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 MSX2P35548 267 aaPredicted RBP10.42□□□□□ -0.74
COL6A1-205ENST00000492851 DDOSTP39656 456 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 PAX2Q02962 417 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 GK3PQ14409 553 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 KLF17Q5JT82 389 aaPredicted RBP10.42□□□□□ -0.74
COL6A1-205ENST00000492851 TEX30Q5JUR7 227 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 CLEC12AQ5QGZ9 265 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 SHISA2Q6UWI4 295 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 PIGWQ7Z7B1 504 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 NAA40Q86UY6 237 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 PARP8Q8N3A8 854 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 LNX2Q8N448 690 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 MAP6Q96JE9 813 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 DDOQ99489 341 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF747Q9BV97 191 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 EGLN3Q9H6Z9 239 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 ERVK-18Q9QC07 812 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 RNF7Q9UBF6 113 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 LYVE1Q9Y5Y7 322 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 TANC2Q9HCD6 1990 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 TRAV38-1A0A0B4J264 116 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 POM121CA8CG34 1229 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 ENSAO43768 121 aaKnown RBP10.41□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF205O95201 554 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 GASTP01350 101 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 RNASE1P07998 156 aaKnown RBP10.41□□□□□ -0.74
COL6A1-205ENST00000492851 CA6P23280 308 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 OTX1P32242 354 aaPredicted RBP10.41□□□□□ -0.74
COL6A1-205ENST00000492851 PSMB10P40306 273 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 ENTPD1P49961 510 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 SLC25A1P53007 311 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 SNCBQ16143 134 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 PCK2Q16822 640 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 RHOUQ7L0Q8 258 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 OR2T33Q8NG76 320 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 KCNJ15Q99712 375 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 NUDT16L1Q9BRJ7 211 aaKnown RBP10.41□□□□□ -0.74
COL6A1-205ENST00000492851 COPS4Q9BT78 406 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 FN3KQ9H479 309 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 TOR3AQ9H497 397 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 REEP1Q9H902 201 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 ARL8BQ9NVJ2 186 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 C14orf119Q9NWQ9 140 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 DYSFO75923 2080 aa10.41□□□□□ -0.74
COL6A1-205ENST00000492851 DNAJC9-AS1A6NH13 148 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF593O00488 134 aaPredicted RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 XRCC2O43543 280 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 FAM20BO75063 409 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 PLATP00750 562 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 HOXB6P17509 224 aaKnown RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 CFL1P23528 166 aaKnown RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 PYCR1P32322 319 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 GRK5P34947 590 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 PMELP40967 661 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 MAGEA2P43356 314 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 GRB2P62993 217 aaKnown RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 GNGT1P63211 74 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 IL13RA1P78552 427 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF92Q03936 586 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 MICAQ29983 383 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 FAM98BQ52LJ0 330 aaKnown RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF362Q5T0B9 420 aaPredicted RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 GPR157Q5UAW9 335 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 WDR25Q64LD2 544 aaPredicted RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF770Q6IQ21 691 aaPredicted RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 DCXRQ7Z4W1 244 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 DHFR2Q86XF0 187 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 PNLDC1Q8NA58 520 aaKnown RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 AQP11Q8NBQ7 271 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 SLC37A3Q8NCC5 494 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 DACT3Q96B18 629 aaPredicted RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 SLAMF6Q96DU3 332 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 ADAT1Q9BUB4 502 aaKnown RBP10.4□□□□□ -0.74
COL6A1-205ENST00000492851 TSSK6Q9BXA6 273 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 DGCR6LQ9BY27 220 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 CENPMQ9NSP4 180 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 TBC1D23Q9NUY8 699 aa10.4□□□□□ -0.74
COL6A1-205ENST00000492851 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 TVP23AA6NH52 213 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 RIIAD1A6NNX1 92 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 ANKRD30BLA7E2S9 258 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 B2RBV5 119 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF878C9JN71 531 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 LGALS8O00214 317 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 P2RY10O00398 339 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 ECDO95905 644 aaPredicted RBP10.39□□□□□ -0.75
COL6A1-205ENST00000492851 SPARCP09486 303 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF3P17036 446 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 EGR1P18146 543 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
COL6A1-205ENST00000492851 SNAI3Q3KNW1 292 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 CYP2R1Q6VVX0 501 aa10.39□□□□□ -0.75
COL6A1-205ENST00000492851 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms