RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 C11orf71Q6IPW1 123 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 PRR22Q8IZ63 422 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TMEM86AQ8N2M4 240 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 Q8N377 158 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 FBXL16Q8N461 479 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 PROKR2Q8NFJ6 384 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 OR51S1Q8NGJ8 323 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 OR9G1Q8NH87 305 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 VCX3AQ9NNX9 186 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 SH2D2AQ9NP31 389 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 AIG1Q9NVV5 245 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 MTCH1Q9NZJ7 389 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 EP300Q09472 2414 aaPredicted RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 TRPM6Q9BX84 2022 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 UTRNP46939 3433 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 KBTBD11-OT1A0A1B0GTJ5 212 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 A0A1B0GUA9 196 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 LOC105371267A0A1B0GV96 52 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 RBMY1BA6NDE4 496 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 RBMY1EA6NEQ0 496 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 EIF3HO15372 352 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNX13-209ENST00000492626 ACSM4P0C7M7 580 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 RBMY1DP0C7P1 496 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 RBMY1A1P0DJD3 496 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 IGF2RP11717 2491 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 AK4P27144 223 aaPredicted RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 KIR2DS4P43632 304 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 VDAC2P45880 294 aaPredicted RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 RPS5P46782 204 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 ACTA2P62736 377 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 ACTG2P63267 376 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 ACTC1P68032 377 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 ACTA1P68133 377 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 SRSF6Q13247 344 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 NCF4Q15080 339 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 DEFB109BQ30KR1 87 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 CDC20BQ86Y33 519 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 SPERTQ8NA61 448 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 C9orf106Q8NAJ2 232 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 OR5B3Q8NH48 314 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 LYPD6BQ8NI32 183 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 IL22RA2Q969J5 263 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 C9orf72Q96LT7 481 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 NOL4LQ96MY1 436 aaPredicted RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 ZNF599Q96NL3 588 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 SPZ1Q9BXG8 430 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 RNF167Q9H6Y7 350 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 CYP3A43Q9HB55 503 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 CCDC59Q9P031 241 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 ZNF581Q9P0T4 197 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 CLN8Q9UBY8 286 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 VSIG4Q9Y279 399 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 A0A087WWV3 80 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 GLYATL1P3A0A0U1RQE8 302 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 SERPINE3A8MV23 424 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 FAM220BPB1ANY3 271 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 GAPDHP04406 335 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 KRT16P08779 473 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 IGLL1P15814 213 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 SUB1P53999 127 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNX13-209ENST00000492626 HNRNPA1L2Q32P51 320 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 PTPN20Q4JDL3 420 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 COA6Q5JTJ3 125 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 OR52W1Q6IF63 320 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 FAM173BQ6P4H8 233 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 ZNF547Q8IVP9 402 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 GIMAP1Q8WWP7 306 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 SLC25A38Q96DW6 304 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 OR5B12Q96R08 314 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 KLHDC3Q9BQ90 382 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 ACTR3CQ9C0K3 210 aaPredicted RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 MRM3Q9HC36 420 aaKnown RBP2.34□□□□□ -2.03
SNX13-209ENST00000492626 CLEC5AQ9NY25 188 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 AHSPQ9NZD4 102 aa2.34□□□□□ -2.03
SNX13-209ENST00000492626 NEMFO60524 1076 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 CXCR2P25025 360 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 DCKP27707 260 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 PTGDSP41222 190 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 TNFSF9P41273 254 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 NSG1P42857 185 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 YWHAEP62258 255 aaKnown RBP2.34□□□□□ -2.04
SNX13-209ENST00000492626 CXCL6P80162 114 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 PDIA2Q13087 525 aaKnown RBP2.34□□□□□ -2.04
SNX13-209ENST00000492626 TMEM52BQ4KMG9 183 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 PAN3Q58A45 887 aaKnown RBP2.34□□□□□ -2.04
SNX13-209ENST00000492626 ATAD3CQ5T2N8 411 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 CMTM1Q8IZ96 169 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 SYCE1Q8N0S2 351 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 PUSL1Q8N0Z8 303 aaKnown RBP2.34□□□□□ -2.04
SNX13-209ENST00000492626 FAM58AQ8N1B3 248 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 OR10G3Q8NGC4 313 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 CAPSLQ8WWF8 208 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 NAF1Q96HR8 494 aaKnown RBP2.34□□□□□ -2.04
SNX13-209ENST00000492626 CTRCQ99895 268 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 UGT1A10Q9HAW8 530 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 ZNF275Q9NSD4 429 aaPredicted RBP2.34□□□□□ -2.04
SNX13-209ENST00000492626 PRUNE2Q8WUY3 3088 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 EYSQ5T1H1 3165 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 PTPRJQ12913 1337 aa2.34□□□□□ -2.04
SNX13-209ENST00000492626 ZNF532Q9HCE3 1301 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms