RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 MLNRO43193 412 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 SLC16A7O60669 478 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 PPP1R3DO95685 299 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 CYB5R3P00387 301 aaPredicted RBP16.63■□□□□ 0.25
NELFE-212ENST00000492539 FASP25445 335 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 GNB2P62879 340 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 COX10Q12887 443 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 KCNMB1Q16558 191 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 ADCK1Q86TW2 530 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 JAZF1Q86VZ6 243 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 OR52L1Q8NGH7 329 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 OR5L1Q8NGL2 311 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 OR13G1Q8NGZ3 307 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 RAB40AQ8WXH6 277 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 TAF15Q92804 592 aaKnown RBP eCLIP16.63■□□□□ 0.25
NELFE-212ENST00000492539 NIPSNAP1Q9BPW8 284 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 SLC30A2Q9BRI3 323 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 TMEM246Q9BRR3 403 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 IFT27Q9BW83 186 aa16.63■□□□□ 0.25
NELFE-212ENST00000492539 A0A1B0GWJ7 208 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 RER1O15258 196 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 ZNF205O95201 554 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 SRP9P49458 86 aaKnown RBP16.62■□□□□ 0.25
NELFE-212ENST00000492539 HIST1H3AP68431 136 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 ZNF404Q494X3 552 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 HIST2H3PS2Q5TEC6 136 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 HIST2H3AQ71DI3 136 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 C10orf67Q8IYJ2 551 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 HS3ST5Q8IZT8 346 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 APOBEC3DQ96AK3 386 aaPredicted RBP16.62■□□□□ 0.25
NELFE-212ENST00000492539 NEIL1Q96FI4 390 aaPredicted RBP16.62■□□□□ 0.25
NELFE-212ENST00000492539 ZNF582Q96NG8 517 aaPredicted RBP16.62■□□□□ 0.25
NELFE-212ENST00000492539 ERMAPQ96PL5 475 aaPredicted RBP16.62■□□□□ 0.25
NELFE-212ENST00000492539 PRDM13Q9H4Q3 707 aa16.62■□□□□ 0.25
NELFE-212ENST00000492539 IQCF6A8MYZ5 107 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 SOCS2O14508 198 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 IDH3BO43837 385 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 GPANK1O95872 356 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 ANXA8P13928 327 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 MDKP21741 143 aaPredicted RBP16.61■□□□□ 0.25
NELFE-212ENST00000492539 PDLIM3Q53GG5 364 aaPredicted RBP16.61■□□□□ 0.25
NELFE-212ENST00000492539 ZFP1Q6P2D0 407 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 C16orf87Q6PH81 154 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 PTCHD4Q6ZW05 846 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 OR8D4Q8NGM9 314 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 OR5K1Q8NHB7 308 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 PYDC1Q8WXC3 89 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 LRTOMTQ8WZ04 291 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 PLEKHA8Q96JA3 519 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 COQ7Q99807 217 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 NUAK2Q9H093 628 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 TBC1D23Q9NUY8 699 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 MMP24Q9Y5R2 645 aa16.61■□□□□ 0.25
NELFE-212ENST00000492539 KIR2DS1A0A191URI9 304 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 MDFIC2A0A1B0GVS7 189 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 BHLHE40O14503 412 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 PMELP40967 661 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 ZSCAN26Q16670 478 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 CLEC12AQ5QGZ9 265 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 MOGAT3Q86VF5 341 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 OR8B3Q8NGG8 313 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 TMIGD2Q96BF3 282 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 OR8B2Q96RD0 313 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 HDHD2Q9H0R4 259 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 RERGLQ9H628 205 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 ZNF556Q9HAH1 456 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 LHFPL6Q9Y693 200 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 VWFP04275 2813 aa16.6■□□□□ 0.25
NELFE-212ENST00000492539 PRKDCP78527 4128 aaKnown RBP16.6■□□□□ 0.25
NELFE-212ENST00000492539 LRRC30A6NM36 301 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 F5H5P2 479 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 SOX14O95416 240 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 PRKACGP22612 351 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 NOS3P29474 1203 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 CDKN2AP42771 156 aaKnown RBP16.59■□□□□ 0.25
NELFE-212ENST00000492539 GATA4P43694 442 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 DEFA6Q01524 100 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 FAM201AQ5SY85 155 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 COLCA1Q6ZS62 124 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 AMIGO2Q86SJ2 522 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 C1orf87Q8N0U7 546 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 GJC3Q8NFK1 279 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 DNAJC9Q8WXX5 260 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 NUDT16L1Q9BRJ7 211 aaKnown RBP16.59■□□□□ 0.25
NELFE-212ENST00000492539 TSSK6Q9BXA6 273 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 BAIAP2Q9UQB8 552 aa16.59■□□□□ 0.25
NELFE-212ENST00000492539 IGHV3-64DA0A0J9YX35 117 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 H3BNX3 289 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 HOXA3O43365 443 aaPredicted RBP16.58■□□□□ 0.24
NELFE-212ENST00000492539 HIST1H1CP16403 213 aaKnown RBP16.58■□□□□ 0.24
NELFE-212ENST00000492539 PITPNBP48739 271 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 RSPO1Q2MKA7 263 aaPredicted RBP16.58■□□□□ 0.24
NELFE-212ENST00000492539 DEFB112Q30KQ8 113 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 KRTAP27-1Q3LI81 207 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 SLC36A3Q495N2 470 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 FAHD1Q6P587 224 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 ZNF841Q6ZN19 808 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 SPATC1Q76KD6 591 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 NLRC3Q7RTR2 1065 aa16.58■□□□□ 0.24
NELFE-212ENST00000492539 LNX2Q8N448 690 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms