RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 PIGXQ8TBF5 258 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 ADAMTS15Q8TE58 950 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 SLC25A43Q8WUT9 341 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-213ENST00000492506 RFT1Q96AA3 541 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 BOD1Q96IK1 185 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 OR5M11Q96RB7 305 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 SDF2Q99470 211 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 VRK1Q99986 396 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-213ENST00000492506 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 SERINC1Q9NRX5 453 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 TXNL4BQ9NX01 149 aaKnown RBP11.37□□□□□ -0.59
HDAC3-213ENST00000492506 BABAM2Q9NXR7 383 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 CMYA5Q8N3K9 4069 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 IGHV1-18A0A0C4DH31 117 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 A0A0G2JPF8 293 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 TRAPPC13A5PLN9 417 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 HNRNPCL3B7ZW38 293 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 TNFRSF11BO00300 401 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 DNPH1O43598 174 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 AKAP8O43823 692 aaKnown RBP11.36□□□□□ -0.59
HDAC3-213ENST00000492506 FCMRO60667 390 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 MPC2O95563 127 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 HNRNPCL4P0DMR1 293 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 LAMP1P11279 417 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 SRP14P37108 136 aaKnown RBP11.36□□□□□ -0.59
HDAC3-213ENST00000492506 RPL35P42766 123 aaKnown RBP11.36□□□□□ -0.59
HDAC3-213ENST00000492506 LRRC74AQ0VAA2 488 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 IL18Q14116 193 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 EFNB3Q15768 340 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 ADIPOQQ15848 244 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 ZNF141Q15928 474 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 VMACQ2NL98 169 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 TSPO2Q5TGU0 170 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 LIN54Q6MZP7 749 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 DEF8Q6ZN54 512 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 MSRB3Q8IXL7 192 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 CMIPQ8IY22 773 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 ARL6IP6Q8N6S5 226 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 NANOGP1Q8N7R0 232 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 LINC01356Q8N9X3 169 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 OR52N1Q8NH53 320 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 TMEM234Q8WY98 164 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 DNAJA3Q96EY1 480 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 HSH2DQ96JZ2 352 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 OR7D2Q96RA2 312 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 SLC25A32Q9H2D1 315 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 OR51M1Q9H341 326 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 PLK3Q9H4B4 646 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 CTPS2Q9NRF8 586 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 CA10Q9NS85 328 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 FLVCR1Q9Y5Y0 555 aa11.36□□□□□ -0.59
HDAC3-213ENST00000492506 B9A039 149 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 SMLR1H3BR10 107 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 SULT1C2O00338 296 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 RP2O75695 350 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 IGFBP1P08833 259 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 TFPIP10646 304 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 BCKDHAP12694 445 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 HOXB9P17482 250 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 APEX1P27695 318 aaKnown RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 S100A3P33764 101 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 APOBEC1P41238 236 aaKnown RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 ASMTP46597 345 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 IDH2P48735 452 aaKnown RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 PPOXP50336 477 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 PRPS1P60891 318 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 RAP2BP61225 183 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 RPS7P62081 194 aaKnown RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 RPL38P63173 70 aaKnown RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 PTGR1Q14914 329 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 HIKESHIQ53FT3 197 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 CASP12Q6UXS9 341 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 OLIG3Q7RTU3 272 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 ZER1Q7Z7L7 766 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 FAM71CQ8NEG0 241 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 OR56A1Q8NGH5 318 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 OR5D16Q8NGK9 328 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 SGMS2Q8NHU3 365 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 OR52E6Q96RD3 313 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 SPATA5L1Q9BVQ7 753 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 NKX6-2Q9C056 277 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 OR11A1Q9GZK7 315 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 POLR2J2Q9GZM3 115 aaKnown RBP11.35□□□□□ -0.59
HDAC3-213ENST00000492506 SLC25A19Q9HC21 320 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 SLC25A37Q9NYZ2 338 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 CHRNA9Q9UGM1 479 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 HDGFL3Q9Y3E1 203 aa11.35□□□□□ -0.59
HDAC3-213ENST00000492506 TRDV1A0A1B0GX56 115 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 ZAR1LA6NP61 321 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 NUDT19A8MXV4 375 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 L7N2F9 121 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 SCAMP2O15127 329 aaKnown RBP11.34□□□□□ -0.59
HDAC3-213ENST00000492506 CSTAP01040 98 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 NMBP08949 121 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 GIPP09681 153 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-213ENST00000492506 OR4A8P0C604 315 aa11.34□□□□□ -0.59
HDAC3-213ENST00000492506 DAOP14920 347 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms