RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TSSC4Q9Y5U2 329 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ADGRA3Q8IWK6 1321 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 PCDH11XQ9BZA7 1347 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 IGKV2-28A0A075B6P5 120 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 IGHV1OR15-9A0A0B4J2B8 117 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 IGHV1-69DA0A0B4J2H0 117 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 A0A0J9YXV3 536 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC22A20A6NK97 555 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 SYCE1LA8MT33 242 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 SERPINE3A8MV23 424 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 BPY2O14599 106 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 RAD51BO15315 384 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 SOCS1O15524 211 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC16A7O60669 478 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MPDU1O75352 247 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MED6O75586 246 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 YIF1AO95070 293 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 IGKV2D-28P01615 120 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MRPL3P09001 348 aaKnown RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 RHOXF2BP0C7M4 288 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 PRKACAP17612 351 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 RAB5AP20339 215 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MSR1P21757 451 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 GABRR2P28476 465 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 BMI1P35226 326 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 RBM34P42696 430 aaKnown RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 KIR3DL2P43630 455 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 PPICP45877 212 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 BCAP31P51572 246 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 NDUFA8P51970 172 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 GFERP55789 205 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 ATP6V0D1P61421 351 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 DGCR6Q14129 220 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 NKAIN1Q4KMZ8 207 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 ABCA11PQ4W5N1 156 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 CAVIN4Q5BKX8 364 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 TCEAL5Q5H9L2 206 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 FAM71E1Q6IPT2 247 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 LINC00336Q6ZUF6 198 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MRPL21Q7Z2W9 205 aaKnown RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 VTCN1Q7Z7D3 282 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 UNC93AQ86WB7 457 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 CALHM1Q8IU99 346 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 CDKL3Q8IVW4 592 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 GPR26Q8NDV2 337 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR6N1Q8NGY5 312 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR8U1Q8NH10 309 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 COQ8AQ8NI60 647 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 ITFG1Q8TB96 612 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 PIH1D2Q8WWB5 315 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 TCEAL3Q969E4 200 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 TOP1MTQ969P6 601 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 ISOC2Q96AB3 205 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 KIAA1143Q96AT1 154 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 DYNLL2Q96FJ2 89 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 NARS2Q96I59 477 aaKnown RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF382Q96SR6 550 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 GPR21Q99679 349 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLIRPQ9GZT3 109 aaKnown RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR52D1Q9H346 318 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 FANCEQ9HB96 536 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 WFDC1Q9HC57 220 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MYOZ1Q9NP98 299 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 DDX19AQ9NUU7 478 aaKnown RBP1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MCUBQ9NWR8 336 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 HYOU1Q9Y4L1 999 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 TMEM14AQ9Y6G1 99 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 COMMD3-BMI1R4GMX3 469 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 FHOD3Q2V2M9 1422 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 MROH7Q68CQ1 1323 aa1.62□□□□□ -2.15
HMGB1P30-201ENST00000492455 TRAV6A0A075B6T7 132 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 COLCA2A8K830 154 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF701M0R085 212 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 HSBP1O75506 76 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 REM1O75628 298 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC22A5O76082 557 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 SNAI1O95863 264 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 OTCP00480 354 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 APCSP02743 223 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CATP04040 527 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 GLAP06280 429 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 KLK1P06870 262 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CRYGCP07315 174 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 DCNP07585 359 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CISD3P0C7P0 127 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 GFAPP14136 432 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 PMCHP20382 165 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CD70P32970 193 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CFHR2P36980 270 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 PSMD4P55036 377 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CLDN6P56747 220 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 RPL23P62829 140 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CACNG7P62955 275 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 LCN2P80188 198 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 CDK5Q00535 292 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 C16orf72Q14CZ0 275 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 WDR43Q15061 677 aaKnown RBP eCLIP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 RBMY1FQ15415 496 aaKnown RBP1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 TSC22D1Q15714 1073 aa1.61□□□□□ -2.15
HMGB1P30-201ENST00000492455 C5orf64Q2M2E5 130 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms