RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ZNF726A6NNF4 738 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 FAM25EA8MYX2 175 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 F5H5P2 479 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 SOCS1O15524 211 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 PMP2P02689 132 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 HCKP08631 526 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 PATE4P0C8F1 98 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF17P17021 662 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 THEM4Q5T1C6 240 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 GLIPR1L1Q6UWM5 242 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 YRDCQ86U90 279 aaKnown RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 SPICQ8N5J4 248 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 COQ8AQ8NI60 647 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 RBM24Q9BX46 236 aaKnown RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 PROK2Q9HC23 129 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 PNRC2Q9NPJ4 139 aaKnown RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 TAS2R8Q9NYW2 309 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 RABL2AQ9UBK7 228 aaPredicted RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 UBQLN2Q9UHD9 624 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 RABL2BQ9UNT1 228 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 KIAA1549Q9HCM3 1950 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 MCRIP1C9JLW8 97 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 HLA-AP01891 365 aaKnown RBP10.99□□□□□ -0.65
HMGN1-220ENST00000492280 IL5P05113 134 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 PI3P19957 117 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 RAB3AP20336 220 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 NFYAP23511 347 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-220ENST00000492280 OTX2P32243 289 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 RFC3P40938 356 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 DLX5P56178 289 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 C1orf100Q5SVJ3 147 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM105Q8N8V8 129 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 C15orf40Q8WUR7 153 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM41AQ96HV5 264 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 ZC3H10Q96K80 434 aaKnown RBP10.99□□□□□ -0.65
HMGN1-220ENST00000492280 GPER1Q99527 375 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 UTP23Q9BRU9 249 aaKnown RBP10.99□□□□□ -0.65
HMGN1-220ENST00000492280 SNRPGP15A8MWD9 76 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 SPDEFO95238 335 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 PLATP00750 562 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 CFPP27918 469 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 CD96P40200 585 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 STARP49675 285 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 SCAND1P57086 179 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 CXADRP78310 365 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 DHRS2Q13268 280 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF260Q3ZCT1 412 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 LY6G6FQ5SQ64 297 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 C1QL2Q7Z5L3 287 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 UBALD2Q8IYN6 164 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 OR5AS1Q8N127 324 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 STEAP2Q8NFT2 490 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 NAT6Q93015 286 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 DMRTA2Q96SC8 542 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 EMC3Q9P0I2 261 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 KCNK7Q9Y2U2 307 aa10.99□□□□□ -0.65
HMGN1-220ENST00000492280 NOP16Q9Y3C1 178 aaKnown RBP10.99□□□□□ -0.65
HMGN1-220ENST00000492280 LOC390937A0A1W2PQ73 354 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 AQP7P3A6NL99 342 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 ETV2O00321 342 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-220ENST00000492280 OR2A4O95047 310 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 ITGB2P05107 769 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 KLK3P07288 261 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-220ENST00000492280 PPP3CBP16298 524 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 FAHP16930 419 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 NAGAP17050 411 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 AVPR2P30518 371 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 RAP2BP61225 183 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SEC61A1P61619 476 aaKnown RBP10.98□□□□□ -0.65
HMGN1-220ENST00000492280 BAMBIQ13145 260 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 ESCO2Q56NI9 601 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 FAM209AQ5JX71 171 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SLC25A47Q6Q0C1 308 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 TMPPEQ6ZT21 453 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 FADS6Q8N9I5 356 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 ADAD2Q8NCV1 583 aaKnown RBP10.98□□□□□ -0.65
HMGN1-220ENST00000492280 ST8SIA4Q92187 359 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 OXGR1Q96P68 337 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 NECAB3Q96P71 396 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-220ENST00000492280 OR2A7Q96R45 310 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SRXN1Q9BYN0 137 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 CST11Q9H112 138 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 GLTPQ9NZD2 209 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 DKKL1Q9UK85 242 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 IGKV1-9A0A0C4DH69 117 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 OR2AT4A6NND4 320 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SIGLEC5O15389 551 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 LAMTOR5O43504 91 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SSX5O60225 188 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 IFNA7P01567 189 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 AKR1C4P17516 323 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 VAMP1P23763 118 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 MSX1P28360 303 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SIGLEC14Q08ET2 396 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 RNASE10Q5GAN6 216 aaKnown RBP10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SLC25A53Q5H9E4 307 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 PLAC9Q5JTB6 97 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 RFPL4BQ6ZWI9 263 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 SLC22A24Q8N4F4 322 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 OR2AE1Q8NHA4 323 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms