RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SLC25A30Q5SVS4 291 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 LINC01590Q5TEZ4 76 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 MBNL2Q5VZF2 373 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 CORO6Q6QEF8 472 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 DPY19L4Q7Z388 723 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 GJC3Q8NFK1 279 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 OR51G2Q8NGK0 314 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 ABHD4Q8TB40 342 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 SLC7A6Q92536 515 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 RNFT2Q96EX2 444 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 MRPL22Q9NWU5 206 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 PLEK2Q9NYT0 353 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 TREM2Q9NZC2 230 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 LAMP5Q9UJQ1 280 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 RPL36Q9Y3U8 105 aaKnown RBP10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 ANK2Q01484 3957 aa10.78□□□□□ -0.68
SEC61A1-206ENST00000491668 PPIHO43447 177 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 SGCEO43556 437 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 DOK2O60496 412 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 MYF6P23409 242 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 THBS2P35442 1172 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 RPS27P42677 84 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 SELENOVP59797 346 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 ISL1P61371 349 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 PPP1CBP62140 327 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 CDK5R2Q13319 367 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 TAF13Q15543 124 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 KRTAP24-1Q3LI83 254 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 ZNF718Q3SXZ3 478 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 USP51Q70EK9 711 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 VASH1Q7L8A9 365 aaPredicted RBP10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 SLC16A9Q7RTY1 509 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 DCXRQ7Z4W1 244 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 TIGD4Q8IY51 512 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 THEM6Q8WUY1 208 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 C4orf45Q96LM5 186 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 ANKRD60Q9BZ19 345 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 AMBNQ9NP70 447 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 HAO2Q9NYQ3 351 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 EIF3KQ9UBQ5 218 aaKnown RBP10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 CYB5R1Q9UHQ9 305 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 GPR160Q9UJ42 338 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 LHFPL6Q9Y693 200 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 TMEM14AQ9Y6G1 99 aa10.77□□□□□ -0.69
SEC61A1-206ENST00000491668 IGHV1-69-2A0A0G2JMI3 117 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 OR6C6A6NF89 314 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 RER1O15258 196 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 SPRY3O43610 288 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 FAM20BO75063 409 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 APOL3O95236 402 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 COX5BP10606 129 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 DBTP11182 482 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 GABRB1P18505 474 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 HTR5AP47898 357 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 ZNF81P51508 661 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 DVL1P1P54792 670 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 ZNF91Q05481 1191 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 PSG7Q13046 419 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 SMN1Q16637 294 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 KLHL22Q53GT1 634 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 CCDC92Q53HC0 331 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 TEX30Q5JUR7 227 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 AVPI1Q5T686 147 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 SLC18B1Q6NT16 456 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 SLC35F2Q8IXU6 374 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 BPIFB6Q8NFQ5 453 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 OR10H4Q8NGA5 316 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 SNX33Q8WV41 574 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 YIPF3Q9GZM5 350 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 MARCH7Q9H992 704 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 MSL2Q9HCI7 577 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 CENPMQ9NSP4 180 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 TBCCD1Q9NVR7 557 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 DCAF16Q9NXF7 216 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 PCDHGB1Q9Y5G3 927 aa10.76□□□□□ -0.69
SEC61A1-206ENST00000491668 IRGMA1A4Y4 181 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 B4DSR2 109 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 ZNF670-ZNF695F2Z2N8 137 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 WBP4O75554 376 aaKnown RBP10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 FADS2O95864 444 aaKnown RBP10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 LYNP07948 512 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 ADH4P08319 380 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 DBHP09172 617 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 SBK2P0C263 348 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 GCH1P30793 250 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 CSNK2BP67870 215 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 MVKQ03426 396 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 MED21Q13503 144 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 RSPO1Q2MKA7 263 aaPredicted RBP10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 HIST2H3PS2Q5TEC6 136 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 CFAP77Q6ZQR2 320 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 Q6ZR03 302 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 SPATC1Q76KD6 591 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 OTOSQ8NHW6 89 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 APH1BQ8WW43 257 aa10.75□□□□□ -0.69
SEC61A1-206ENST00000491668 MNTQ99583 582 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms