RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 PPP3CBP16298 524 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 PPIAP62937 165 aaKnown RBP6.55□□□□□ -1.36
NPHP3-208ENST00000490993 RPS27AP62979 156 aaKnown RBP6.55□□□□□ -1.36
NPHP3-208ENST00000490993 UBA52P62987 128 aaKnown RBP6.55□□□□□ -1.36
NPHP3-208ENST00000490993 GLDNQ6ZMI3 551 aaPredicted RBP6.55□□□□□ -1.36
NPHP3-208ENST00000490993 KCNK17Q96T54 332 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 MICU1Q9BPX6 476 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 SLC5A7Q9GZV3 580 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 BCO1Q9HAY6 547 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 FBXL2Q9UKC9 423 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 KLHDC2Q9Y2U9 406 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 NINQ8N4C6 2090 aa6.55□□□□□ -1.36
NPHP3-208ENST00000490993 A0A1B0GTH9 108 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 SCGB1D2O95969 90 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ANXA7P20073 488 aaKnown RBP6.54□□□□□ -1.36
NPHP3-208ENST00000490993 OR1C1Q15619 314 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 PCK2Q16822 640 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 GLCCI1Q86VQ1 547 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 RFLNBQ8N5W9 214 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 APCDD1LQ8NCL9 501 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 OR4C16Q8NGL9 310 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 OR1F12Q8NHA8 337 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 SPSB1Q96BD6 273 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 UPRTQ96BW1 309 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 REEP6Q96HR9 211 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 FAM166BA8MTA8 275 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 HSPA12AO43301 675 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 MPZL1O95297 269 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 CD82P27701 267 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 OPCMLQ14982 345 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ATXN7L3Q14CW9 347 aaPredicted RBP6.54□□□□□ -1.36
NPHP3-208ENST00000490993 MDGA2Q7Z553 956 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ZNF441Q8N8Z8 693 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 NINJ1Q92982 152 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 FOXB1Q99853 325 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 CCDC88CQ9P219 2028 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 SSX4O60224 188 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 DHRS3O75911 302 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ABHD16AO95870 558 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 CD3DP04234 171 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ACSM4P0C7M7 580 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 RAD52P43351 418 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 RNPS1Q15287 305 aaKnown RBP6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ALKBH2Q6NS38 261 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 CCDC28AQ8IWP9 274 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ASB5Q8WWX0 329 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 PIGTQ969N2 578 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 SPIN2AQ99865 258 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 SPIN2BQ9BPZ2 258 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 CKAP5Q14008 2032 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 TRBV5-7A0A0A0MS05 114 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 MS4A18H0YCH9 400 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 DVL2O14641 736 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 ISG15P05161 165 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 CCL3P10147 92 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 KIR3DL2P43630 455 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 FOXK1P85037 733 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 PCOLCEQ15113 449 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 GRK1Q15835 563 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 MS4A18Q3C1V0 323 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 OTPQ5XKR4 325 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 HSD17B8Q92506 261 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 KCNIP1Q9NZI2 227 aa6.54□□□□□ -1.36
NPHP3-208ENST00000490993 TMEM235A6NFC5 223 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 SERPINE3A8MV23 424 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 F10P00742 488 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 KNG1P01042 644 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 ZNF35P13682 527 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 CLDN6P56747 220 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 KLF9Q13886 244 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-208ENST00000490993 RBM39Q14498 530 aaKnown RBP6.53□□□□□ -1.36
NPHP3-208ENST00000490993 GSG1Q2KHT4 349 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 WIPI1Q5MNZ9 446 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-208ENST00000490993 CMTM1Q8IZ96 169 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 SPICQ8N5J4 248 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 NFAM1Q8NET5 270 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-208ENST00000490993 FNDC9Q8TBE3 224 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 SUN5Q8TC36 379 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 PAQR8Q8TEZ7 354 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 NECAP2Q9NVZ3 263 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 C1orf123Q9NWV4 160 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 UBE2J1Q9Y385 318 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-208ENST00000490993 SPEF1Q9Y4P9 236 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 RER1O15258 196 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 NRASP01111 189 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 PMP2P02689 132 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 ADRA2AP08913 450 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 HLA-DOBP13765 273 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 ACP1P24666 158 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 MFGE8Q08431 387 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-208ENST00000490993 TBC1D28Q2M2D7 210 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 LINC00303Q3SY05 128 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 SLC25A53Q5H9E4 307 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 ZNF574Q6ZN55 896 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-208ENST00000490993 ZNF546Q86UE3 836 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 COMMD7Q86VX2 200 aa6.53□□□□□ -1.36
NPHP3-208ENST00000490993 SLC7A5P1Q8MH63 180 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms