RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 OR6X1Q8NH79 312 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ITFG1Q8TB96 612 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 DNAJB3Q8WWF6 145 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 CPNE4Q96A23 557 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 RPEQ96AT9 228 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 STARD4Q96DR4 205 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF75AQ96N20 296 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 SERPINB12Q96P63 405 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 OXGR1Q96P68 337 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 MS4A4EQ96PG1 132 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR8B4Q96RC9 309 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 RBBP8Q99708 897 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR51V1Q9H2C8 321 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACP6Q9NPH0 428 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 RMND1Q9NWS8 449 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 C1orf109Q9NX04 203 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 LGALS13Q9UHV8 139 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 C3orf18Q9UK00 162 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 EVC2Q86UK5 1308 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 TTC21AQ8NDW8 1320 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 RAD50Q92878 1312 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 RLFQ13129 1914 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 SEC14L6B5MCN3 397 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 GOLGA8KD6RF30 607 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 CLDN34H7C241 214 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 hCG_2039718K7EN88 272 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC9A3R1O14745 358 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 FAM189A1O60320 539 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 ICOSLGO75144 302 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 CLDN11O75508 207 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 TNFSF13O75888 250 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 PSMG1O95456 288 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 NSA2O95478 260 aaKnown RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC25A27O95847 323 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 GP1BAP07359 652 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 GOLGA8HP0CJ92 632 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 HLA-GP17693 338 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 RCC1P18754 421 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR1E1P30953 314 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 DDOSTP39656 456 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 PTGDSP41222 190 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 TFPI2P48307 235 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 GSSP48637 474 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 PRLHRP49683 370 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 SSR4P51571 173 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 STXBP1P61764 594 aaKnown RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 RPL10AP62906 217 aaKnown RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 TPBGQ13641 420 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 MAD2L1BPQ15013 274 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 ATP6AP1Q15904 470 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 C5orf64Q2M2E5 130 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 MARCH8Q5T0T0 291 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 IDNKQ5T6J7 187 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 AHSA2Q719I0 299 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 PLA2G4DQ86XP0 818 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 PDIK1LQ8N165 341 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 MREGQ8N565 214 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 MDS2Q8NDY4 140 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR51F2Q8NH61 342 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 ERMNQ8TAM6 284 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 SRSF12Q8WXF0 261 aaKnown RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR8D1Q8WZ84 308 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 ARPC1AQ92747 370 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 FAM104AQ969W3 186 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 OPTNQ96CV9 577 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 OTUB2Q96DC9 234 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR2M2Q96R28 347 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 SORT1Q99523 831 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF426Q9BUY5 554 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR11A1Q9GZK7 315 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 ING2Q9H160 280 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC40A1Q9NP59 571 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 FKBP14Q9NWM8 211 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 MAT2BQ9NZL9 334 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 VAPAQ9P0L0 249 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 POLR3HQ9Y535 204 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 AK9Q5TCS8 1911 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 CNTNAP1P78357 1384 aa3.12□□□□□ -1.91
HMGB1P38-201ENST00000490557 PDS5BQ9NTI5 1447 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 IGKV1D-8A0A087WSZ0 117 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 GLYATL1P3A0A0U1RQE8 302 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 A0A1B0GW55 424 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 TVP23AA6NH52 213 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 LYRM9A8MSI8 78 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 LRRN3E7EW58 273 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 K7EN84 100 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 SGCEO43556 437 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 TDP2O95551 362 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 HLA-DRAP01903 254 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 FGF1P05230 155 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 RETP07949 1114 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 CHTF8P0CG12 524 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUX4L2P0CJ85 424 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUX4L3P0CJ86 424 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUX4L5P0CJ88 424 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUX4L6P0CJ89 424 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUX4L7P0CJ90 424 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 TGM4P49221 684 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 RGS6P49758 472 aa3.11□□□□□ -1.91
HMGB1P38-201ENST00000490557 DLX1P56177 255 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms