RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SMIM4Q8WVI0 70 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 PRSS44E7EML9 344 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 PDGFBP01127 241 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-209ENST00000489180 MYF5P13349 255 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 MGMTP16455 207 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 C12orf73Q69YU5 71 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF687Q8N1G0 1237 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 EXD3Q8N9H8 876 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 C2orf50Q96LR7 162 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 GDF2Q9UK05 429 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-209ENST00000489180 B9D1Q9UPM9 204 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 E5RGE8 158 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 UBE2G1P62253 170 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 CDONQ4KMG0 1287 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 NEURL2Q9BR09 285 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 MMP17Q9ULZ9 603 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 SLC17A4Q9Y2C5 497 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 NSG2Q9Y328 171 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 MRPS2Q9Y399 296 aaKnown RBP15.93■□□□□ 0.14
NPHP4-209ENST00000489180 FABP6P51161 128 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 MMP15P51511 669 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 TCTE3Q8IZS6 198 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 GNPNAT1Q96EK6 184 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-209ENST00000489180 OXGR1Q96P68 337 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 TJP1Q07157 1748 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 BTBD17A6NE02 478 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 CTXN2P0C2S0 81 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 PRR35P0CG20 571 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF787Q6DD87 383 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 C6orf15Q6UXA7 325 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-209ENST00000489180 DEFB108BQ8NET1 73 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 STRAPQ9Y3F4 350 aaKnown RBP15.92■□□□□ 0.14
NPHP4-209ENST00000489180 MEIKINA0A087WXM9 373 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 AQP7P3A6NL99 342 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 SH2D1BO14796 132 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 CXCL13O43927 109 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 NTF3P20783 257 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 AVPR2P30518 371 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 MYO5AQ9Y4I1 1855 aaKnown RBP15.92■□□□□ 0.14
NPHP4-209ENST00000489180 AQP8O94778 261 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 PEX11BO96011 259 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 S100A7P31151 101 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 UBE2G2P60604 165 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 ARL16Q0P5N6 197 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 BPIFCQ8NFQ6 507 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 LAMB1P07942 1786 aa15.92■□□□□ 0.14
NPHP4-209ENST00000489180 LRRC30A6NM36 301 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 SHISA8B8ZZ34 492 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 DSCR3O14972 297 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 BCL2L11O43521 198 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 PLRG1O43660 514 aaKnown RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 VAMP5O95183 116 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 CTRB1P17538 263 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 HAAOP46952 286 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 CAPZBP47756 277 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 RNF151Q2KHN1 245 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 CTRB2Q6GPI1 263 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 MORN4Q8NDC4 146 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 KTI12Q96EK9 354 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 MRGPRX1Q96LB2 322 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 RCL1Q9Y2P8 373 aaKnown RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 TO15178 435 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 GPANK1O95872 356 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 CD37P11049 281 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 B4GALT1P15291 398 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 IL3RAP26951 378 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 GPR12P47775 334 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 YBX1P67809 324 aaKnown RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 TMEM104Q8NE00 496 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 LHX4Q969G2 390 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 UQCC2Q9BRT2 126 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 RYDENQ9NUL5 291 aaKnown RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 RNF150Q9ULK6 438 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 TRAV1-2A0A0B4J238 106 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 C4orf47A7E2U8 309 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 H0YIG0 161 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 NME1P15531 152 aaKnown RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 TGM1P22735 817 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 RPL11P62913 178 aaKnown RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 FOXF1Q12946 379 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 SHBQ15464 509 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 MSRB3Q8IXL7 192 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 MAP6Q96JE9 813 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 CPN1P15169 458 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 DND1Q8IYX4 353 aaKnown RBP15.91■□□□□ 0.14
NPHP4-209ENST00000489180 OR13D1Q8NGV5 346 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 GPX8Q8TED1 209 aa15.91■□□□□ 0.14
NPHP4-209ENST00000489180 ZBTB37Q5TC79 503 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 ST8SIA1Q92185 356 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 ARHGDIGQ99819 225 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 GINS3Q9BRX5 216 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 PSENENQ9NZ42 101 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 CLCF1Q9UBD9 225 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 SLC25A26Q70HW3 274 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 C11orf40Q8WZ69 217 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 OR2A14Q96R47 310 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 ST3GAL6Q9Y274 331 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 WNT1P04628 370 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 FAHP16930 419 aa15.9■□□□□ 0.14
NPHP4-209ENST00000489180 GLRA1P23415 457 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms