RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PPP1R3CQ9UQK1 317 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 WIPI2Q9Y4P8 454 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 ISPDA4D126 451 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 TBX1O43435 398 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 MITFO75030 526 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-218ENST00000489037 IFNA2P01563 188 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 PSKH1P11801 424 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 IL2RGP31785 369 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 CX3CR1P49238 355 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 KPNB1Q14974 876 aaKnown RBP12.1□□□□□ -0.47
BRCA1-218ENST00000489037 TIGD6Q17RP2 521 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 OTOSQ8NHW6 89 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 RNF133Q8WVZ7 376 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 GAL3ST1Q99999 423 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
BRCA1-218ENST00000489037 SLC30A2Q9BRI3 323 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 LAMP5Q9UJQ1 280 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 ORC6Q9Y5N6 252 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 CACNG2Q9Y698 323 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 NF1P21359 2839 aa12.1□□□□□ -0.47
BRCA1-218ENST00000489037 DOCK11Q5JSL3 2073 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 SAC3D1A6NKF1 404 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 SELENOFO60613 162 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 SLC2A1P11166 492 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 CFL1P23528 166 aaKnown RBP12.09□□□□□ -0.47
BRCA1-218ENST00000489037 NAA10P41227 235 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-218ENST00000489037 ZNF92Q03936 586 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 SNAI3Q3KNW1 292 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 SLX4IPQ5VYV7 408 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 KCTD18Q6PI47 426 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-218ENST00000489037 SLC16A9Q7RTY1 509 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 GLCCI1Q86VQ1 547 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 BBS1Q8NFJ9 593 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 OR10AD1Q8NGE0 317 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 OR52H1Q8NGJ2 320 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 OR2AE1Q8NHA4 323 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 C1orf159Q96HA4 380 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 PGAM5Q96HS1 289 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 TEAD3Q99594 435 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 REPIN1Q9BWE0 567 aaKnown RBP12.09□□□□□ -0.47
BRCA1-218ENST00000489037 YIPF3Q9GZM5 350 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 OR10A2Q9H208 303 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 ZNF665Q9H7R5 613 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 NIPAL2Q9H841 368 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 TMEM106BQ9NUM4 274 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 DNAJC27Q9NZQ0 273 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 OAZ3Q9UMX2 235 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 PCDHB10Q9UN67 800 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 NPTNQ9Y639 398 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 TMEM14AQ9Y6G1 99 aa12.09□□□□□ -0.47
BRCA1-218ENST00000489037 LRRC30A6NM36 301 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 CD300LBA8K4G0 201 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 PRKYO43930 277 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 SBK2P0C263 348 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 IRF2P14316 349 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 SLC2A5P22732 501 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 DDOSTP39656 456 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 DVL1P1P54792 670 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-218ENST00000489037 MZT1Q08AG7 82 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 OR8G1Q15617 311 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 GLYATL3Q5SZD4 288 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 FAM57BQ71RH2 274 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 C1orf87Q8N0U7 546 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 TCEANCQ8N8B7 351 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 OR51F2Q8NH61 342 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 MEGF10Q96KG7 1140 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 CIB1Q99828 191 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 SOX7Q9BT81 388 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 RIBC2Q9H4K1 309 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 BRD7Q9NPI1 651 aa12.08□□□□□ -0.48
BRCA1-218ENST00000489037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-218ENST00000489037 SLC22A31A6NKX4 558 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 ANKRD30BLA7E2S9 258 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 F5H5P2 479 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 H0YL77 283 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 WNT9BO14905 357 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 GMDSO60547 372 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 HLA-DPB1P04440 258 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 MSMBP08118 114 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 OPRL1P41146 370 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 PRSS12P56730 875 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 ZNF121P58317 390 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-218ENST00000489037 LMO4P61968 165 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 SNCBQ16143 134 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 CR1LQ2VPA4 569 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 SPRNQ5BIV9 151 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 NXNL2Q5VZ03 156 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 C12orf73Q69YU5 71 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 MEPCEQ7L2J0 689 aaKnown RBP12.07□□□□□ -0.48
BRCA1-218ENST00000489037 GID4Q8IVV7 300 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 KLHL36Q8N4N3 616 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 SPICQ8N5J4 248 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 CELF2-AS1Q8N7Q2 184 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 SPERTQ8NA61 448 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 OR11L1Q8NGX0 322 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 TMEM163Q8TC26 289 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 ERGIC1Q969X5 290 aa12.07□□□□□ -0.48
BRCA1-218ENST00000489037 PKP2Q99959 881 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms