RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 LRRC29Q8WV35 223 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 TOP1MTQ969P6 601 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 DCPSQ96C86 337 aaKnown RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 LRRC58Q96CX6 371 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 RCN3Q96D15 328 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 NRBF2Q96F24 287 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 MSANTD3Q96H12 275 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 WFIKKN1Q96NZ8 548 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ING2Q9H160 280 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 ARMC7Q9H6L4 198 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 KIR3DX1Q9H7L2 352 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 UBE2ZQ9H832 354 aaPredicted RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 CTSFQ9UBX1 484 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 YTHDF2Q9Y5A9 579 aaKnown RBP1.9□□□□□ -2.11
RFC4-213ENST00000489028 KPTNQ9Y664 436 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 DOCK9Q9BZ29 2069 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 WDR62O43379 1518 aa1.9□□□□□ -2.11
RFC4-213ENST00000489028 CARMIL3Q8ND23 1372 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 IGLV1-36A0A0B4J1U3 117 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 LOC100506127A0A0U1RQW1 187 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ERICH4A6NGS2 130 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 HACD1B0YJ81 288 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ZNF879B4DU55 563 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 E7EWF7 191 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 INS-IGF2F8WCM5 200 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 H3BN98 237 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 NME4O00746 187 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 NVLO15381 856 aaKnown RBP1.89□□□□□ -2.11
RFC4-213ENST00000489028 ERI3O43414 337 aaKnown RBP1.89□□□□□ -2.11
RFC4-213ENST00000489028 APOA1P02647 267 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 GLAP06280 429 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 EIF4EP06730 217 aaKnown RBP1.89□□□□□ -2.11
RFC4-213ENST00000489028 OR8U9P0C7N5 309 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 USF1P22415 310 aaPredicted RBP1.89□□□□□ -2.11
RFC4-213ENST00000489028 HCAR3P49019 387 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 FABP6P51161 128 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ZNF138P52744 262 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 AP1S2P56377 157 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 TAS2R39P59534 338 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ATP6V0D1P61421 351 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ERCC8Q13216 396 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 SLC39A6Q13433 755 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 KIR2DS1Q14954 304 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 VAMP3Q15836 100 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 Q3ZCU0 254 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 C5orf47Q569G3 176 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 METTL21CQ5VZV1 264 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 PCP2Q8IVA1 136 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 KIF2BQ8N4N8 673 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 METTL13Q8N6R0 699 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 NPWQ8N729 165 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ZFP41Q8N8Y5 198 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 NOXO1Q8NFA2 376 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 OR4A15Q8NGL6 344 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 OR6K6Q8NGW6 343 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 OR8U1Q8NH10 309 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 LRRC20Q8TCA0 184 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ABHD3Q8WU67 409 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 MRGPRFQ96AM1 343 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 BTN2A3PQ96KV6 586 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 COL21A1Q96P44 957 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 IFI27L2Q9H2X8 130 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 ZNF430Q9H8G1 570 aaPredicted RBP1.89□□□□□ -2.11
RFC4-213ENST00000489028 MED4Q9NPJ6 270 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 PRSS16Q9NQE7 514 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 OR12D3Q9UGF7 316 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 PSG8Q9UQ74 426 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 CABIN1Q9Y6J0 2220 aa1.89□□□□□ -2.11
RFC4-213ENST00000489028 IGKV1D-17A0A075B6S4 117 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 IGHV3OR16-9A0A0B4J2B5 98 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 IGHV3-66A0A0C4DH42 116 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 GOLGA8JA6NMD2 632 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 PDZK1P1A8MUH7 402 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 ANKRD65E5RJM6 399 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 H7C417 338 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 M0QX08 132 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 GABRPO00591 440 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 SLC25A14O95258 325 aaPredicted RBP1.88□□□□□ -2.11
RFC4-213ENST00000489028 LCA5LO95447 670 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 CATP04040 527 aaKnown RBP1.88□□□□□ -2.11
RFC4-213ENST00000489028 CD3GP09693 182 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 TLX1NBP0CAT3 122 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 GOLGA8HP0CJ92 632 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 PRPS2P11908 318 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 CCNOP22674 350 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 IVDP26440 423 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 PFN2P35080 140 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 CSNK1A1P48729 337 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 PRR3P79522 188 aaKnown RBP1.88□□□□□ -2.11
RFC4-213ENST00000489028 KDSRQ06136 332 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 IRF4Q15306 451 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 RGNQ15493 299 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 STK11Q15831 433 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 ORMDL2Q53FV1 153 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 LIN9Q5TKA1 542 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 LINC00336Q6ZUF6 198 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 ST13P4Q8IZP2 240 aaPredicted RBP1.88□□□□□ -2.11
RFC4-213ENST00000489028 UBAC2Q8NBM4 344 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 OR11H7Q8NGC8 314 aa1.88□□□□□ -2.11
RFC4-213ENST00000489028 RGP1Q92546 391 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms