RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 FOLR2P14207 255 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 RABIFP47224 123 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 GSK3AP49840 483 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 AIMP2Q13155 320 aaKnown RBP17.4■□□□□ 0.38
HMG20B-213ENST00000488973 H3F3CQ6NXT2 135 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 MARCH3Q86UD3 253 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 CBLN2Q8IUK8 224 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 CMBLQ96DG6 245 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 NUDT16L1Q9BRJ7 211 aaKnown RBP17.4■□□□□ 0.38
HMG20B-213ENST00000488973 SEC11CQ9BY50 192 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 GHRLQ9UBU3 117 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 TMEM184BQ9Y519 407 aaPredicted RBP17.4■□□□□ 0.38
HMG20B-213ENST00000488973 CDH23Q9H251 3354 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 OR6C76A6NM76 312 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 BPNT1O95861 308 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 IFNA6P05013 189 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 HSD11B1P28845 292 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 SERPINF1P36955 418 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 QRFPP83859 136 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 UNC119Q13432 240 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 OR7A5Q15622 319 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 SLC22A6Q4U2R8 563 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 NKAPLQ5M9Q1 402 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 ACER2Q5QJU3 275 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 DEGS2Q6QHC5 323 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 IL34Q6ZMJ4 242 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 PRR22Q8IZ63 422 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 NUDCD2Q8WVJ2 157 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 ADIPOR1Q96A54 375 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 ADAT1Q9BUB4 502 aaKnown RBP17.4■□□□□ 0.38
HMG20B-213ENST00000488973 RNF126Q9BV68 326 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 TLNRD1Q9H1K6 362 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 CYTL1Q9NRR1 136 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 PNO1Q9NRX1 252 aaKnown RBP17.4■□□□□ 0.38
HMG20B-213ENST00000488973 ZFP57Q9NU63 452 aa17.4■□□□□ 0.38
HMG20B-213ENST00000488973 COL5A1P20908 1838 aaPredicted RBP17.4■□□□□ 0.38
HMG20B-213ENST00000488973 TRANK1O15050 2925 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 A0A1W2PQD3 144 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 PLPP3O14495 311 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 LMX1BO60663 402 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 MPZL1O95297 269 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 NUDT14O95848 222 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 MUC1P15941 1255 aaPredicted RBP17.39■□□□□ 0.37
HMG20B-213ENST00000488973 ZNF823P16415 610 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 PCP4P48539 62 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 TFF2Q03403 129 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 ZNF542PQ5EBM4 170 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 DRAM2Q6UX65 266 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 SELENOIQ9C0D9 397 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 FN3KRPQ9HA64 309 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 THADAQ6YHU6 1953 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 C13orf42A0A1B0GVH6 325 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 TMEM269A0A1B0GVZ9 245 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 KCNAB3O43448 404 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 HEXAP06865 529 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 POLR2HP52434 150 aaKnown RBP17.39■□□□□ 0.37
HMG20B-213ENST00000488973 PNLIPRP2P54317 469 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 PLEKHN1Q494U1 663 aaPredicted RBP17.39■□□□□ 0.37
HMG20B-213ENST00000488973 TMEM31Q5JXX7 168 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 HOGA1Q86XE5 327 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 ST7LQ8TDW4 575 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
HMG20B-213ENST00000488973 OR8D2Q9GZM6 311 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 OPA3Q9H6K4 179 aa17.39■□□□□ 0.37
HMG20B-213ENST00000488973 TMED7-TICAM2A0A0A6YYA0 188 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 A8MVM7 634 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 H0YIG0 161 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 FAM157CP0CG43 387 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 IL12BP29460 328 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 SRSF3P84103 164 aaKnown RBP17.38■□□□□ 0.37
HMG20B-213ENST00000488973 SQSTM1Q13501 440 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 PCK2Q16822 640 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 C1orf140Q5VVS0 124 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 DCXRQ7Z4W1 244 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 SLC26A10Q8NG04 563 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 OR4A4PQ8NGN8 299 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 ALG1L2C9J202 215 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 P2RY10O00398 339 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 WISP1O95388 367 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 ZP2Q05996 745 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 SMCO1Q147U7 214 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 SLC22A24Q8N4F4 322 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 NEU1Q99519 415 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 MAP3K3Q99759 626 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 UQCC1Q9NVA1 299 aa17.38■□□□□ 0.37
HMG20B-213ENST00000488973 ARID1BQ8NFD5 2236 aaPredicted RBP17.37■□□□□ 0.37
HMG20B-213ENST00000488973 IGKV3-11P04433 115 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 CD1CP29017 333 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 SLC26A5P58743 744 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 STARD6P59095 220 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 PJVKQ0ZLH3 352 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 C9orf152Q5JTZ5 239 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 ZFP82Q8N141 532 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 RNASE11Q8TAA1 199 aaKnown RBP17.37■□□□□ 0.37
HMG20B-213ENST00000488973 TMED6Q8WW62 240 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 FGGYQ96C11 551 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 RRNAD1Q96FB5 475 aaKnown RBP17.37■□□□□ 0.37
HMG20B-213ENST00000488973 LANCL2Q9NS86 450 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 CLEC1BQ9P126 229 aa17.37■□□□□ 0.37
HMG20B-213ENST00000488973 FBLN5Q9UBX5 448 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms