RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 LOC105371242A0A075B767 164 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 A8MXK9 166 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 F5H0A9 414 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 GYPBP06028 91 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 IRF2P14316 349 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 EPHA1P21709 976 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 PAICSP22234 425 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 GRK5P34947 590 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 RPS27P42677 84 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 ACTR3P61158 418 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 ZMYND11Q15326 602 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 PCK2Q16822 640 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 ESCO2Q56NI9 601 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 LYPD4Q6UWN0 246 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 OR10S1Q8NGN2 331 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 NANPQ8TBE9 248 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 ZFAND2BQ8WV99 257 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 CANT1Q8WVQ1 401 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 SLCO4A1Q96BD0 722 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 SLAMF6Q96DU3 332 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 FEVQ99581 238 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 KCNJ15Q99712 375 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 NIPSNAP1Q9BPW8 284 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 C7orf69Q9H7B7 122 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF556Q9HAH1 456 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 LRCH1Q9Y2L9 728 aa11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-207ENST00000488921 TCRBV3S1A0A5B6 114 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 F5H5P2 479 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 H0YL77 283 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF593O00488 134 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 XRCC2O43543 280 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 E2F6O75461 281 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 FSTL3O95633 263 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 CD200P41217 278 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 GATA4P43694 442 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 SLC15A1P46059 708 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 GRB2P62993 217 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 SNAI3Q3KNW1 292 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 ZFP1Q6P2D0 407 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 C1orf229Q6ZS94 237 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 USP43Q70EL4 1123 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 NAA40Q86UY6 237 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 MOGAT3Q86VF5 341 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 OR11L1Q8NGX0 322 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF420Q8TAQ5 688 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNRF4Q8WWF5 429 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 JMJD8Q96S16 334 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 ADAT1Q9BUB4 502 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 SUCNR1Q9BXA5 334 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 TOR3AQ9H497 397 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 SP140LQ9H930 580 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 CENPMQ9NSP4 180 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 MIOXQ9UGB7 285 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 OR5V1Q9UGF6 321 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 ANK2Q01484 3957 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 ARHGAP32A7KAX9 2087 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 DOCK11Q5JSL3 2073 aa11.61□□□□□ -0.55
SPTLC1-207ENST00000488921 GGT3PA6NGU5 568 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 CD300LBA8K4G0 201 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 CEACAM18A8MTB9 384 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 GMDSO60547 372 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 CYB5R3P00387 301 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 AVPP01185 164 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 APOC1P02654 83 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 HLA-DPB1P04440 258 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 CLUP10909 449 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 RPS2P15880 293 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 HSD11B1P28845 292 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 PRSS12P56730 875 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 EIF2B1Q14232 305 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 OR8G1Q15617 311 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 SHFQ7M4L6 423 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 ERI1Q8IV48 349 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF511Q8NB15 262 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 Q8TCH9 128 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 INTS14Q96SY0 518 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 TEX12Q9BXU0 123 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 MRPL15Q9P015 296 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 PDP1Q9P0J1 537 aaPredicted RBP11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 AP4S1Q9Y587 144 aa11.6□□□□□ -0.55
SPTLC1-207ENST00000488921 STAB1Q9NY15 2570 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 FKBP6O75344 327 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 GLCEO94923 617 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 PSKH1P11801 424 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 ANXA8P13928 327 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 ADRA2CP18825 462 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 GSTT1P30711 240 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 PRKXP51817 358 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF92Q03936 586 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 MZT1Q08AG7 82 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 HNRNPA0Q13151 305 aaKnown RBP11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 ARMCX4Q5H9R4 360 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 GLYATL3Q5SZD4 288 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 LINC01590Q5TEZ4 76 aa11.59□□□□□ -0.55
SPTLC1-207ENST00000488921 RHOUQ7L0Q8 258 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms