RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 EXTL1Q92935 676 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 OR11A1Q9GZK7 315 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 RASL12Q9NYN1 266 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 TAS2R3Q9NYW6 316 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 FRRS1LQ9P0K9 344 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 ETV7Q9Y603 341 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 TMED7-TICAM2A0A0A6YYA0 188 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 K7EM74 188 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 SMAD9O15198 467 aaKnown RBP11.8□□□□□ -0.52
CHD1L-208ENST00000488864 GTF2F2P13984 249 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 FAUP35544 74 aaKnown RBP11.8□□□□□ -0.52
CHD1L-208ENST00000488864 SUMO3P55854 103 aaPredicted RBP11.8□□□□□ -0.52
CHD1L-208ENST00000488864 LGALS3BPQ08380 585 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 FOXO1Q12778 655 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 Q499Y3 187 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 LY6G6FQ5SQ64 297 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 LINC01590Q5TEZ4 76 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.8□□□□□ -0.52
CHD1L-208ENST00000488864 TMEM234Q8WY98 164 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 NTNG2Q96CW9 530 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 TMEM41AQ96HV5 264 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 TSSK2Q96PF2 358 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 DKKL1Q9UK85 242 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 TMED7Q9Y3B3 224 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 ZNF337Q9Y3M9 751 aa11.8□□□□□ -0.52
CHD1L-208ENST00000488864 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 TMEM72A0PK05 275 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 H3BML4 177 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 UPK3AO75631 287 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 TRAPPC6AO75865 159 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 CEACAM4O75871 244 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 CD3DP04234 171 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 PNMTP11086 282 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 MAPK3P27361 379 aaPredicted RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 RPL35P42766 123 aaKnown RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 TNFSF10P50591 281 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 POLR2HP52434 150 aaKnown RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 B2MP61769 119 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ZNF766Q5HY98 468 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 YRDCQ86U90 279 aaKnown RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 OR5AK2Q8NH90 309 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 POC1BQ8TC44 478 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 KTI12Q96EK9 354 aaPredicted RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ZNF75AQ96N20 296 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 NKX3-1Q99801 234 aaPredicted RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 NMNAT2Q9BZQ4 307 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 SLITRK2Q9H156 845 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 EXO5Q9H790 373 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 MRM2Q9UI43 246 aaKnown RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 PURGQ9UJV8 347 aaKnown RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 SLC6A5Q9Y345 797 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 NCKAP5O14513 1909 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 DNAJC13O75165 2243 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ZNF407Q9C0G0 2248 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ZNF98A6NK75 572 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 FAM166BA8MTA8 275 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 EFNA2O43921 213 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 CBR3O75828 277 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 CSF1P09603 554 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 CD46P15529 392 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 CXADRP78310 365 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 MPPED2Q15777 294 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ODF4Q2M2E3 257 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 BEX5Q5H9J7 111 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 RAET1LQ5VY80 246 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 MOB3CQ70IA8 216 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ZNF546Q86UE3 836 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 C10orf53Q8N6V4 93 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 OR51D1Q8NGF3 324 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ST8SIA1Q92185 356 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 C5orf34Q96MH7 638 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 FAM173AQ9BQD7 235 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 MRI1Q9BV20 369 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ACACBO00763 2458 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 ALPK2Q86TB3 2170 aa11.79□□□□□ -0.52
CHD1L-208ENST00000488864 TRAV18A0A075B6X5 111 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 NME2P1O60361 137 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 ZIC3O60481 467 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 CTAG2O75638 210 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 MGMTP16455 207 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 NME2P22392 152 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 GDF1P27539 372 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 RBM34P42696 430 aaKnown RBP11.78□□□□□ -0.52
CHD1L-208ENST00000488864 MEOX1P50221 254 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 ALKBH1Q13686 389 aaKnown RBP11.78□□□□□ -0.52
CHD1L-208ENST00000488864 LIPNQ5VXI9 398 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 OR51A4Q8NGJ6 313 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 C15orf40Q8WUR7 153 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 NARS2Q96I59 477 aaKnown RBP11.78□□□□□ -0.52
CHD1L-208ENST00000488864 ARL5BQ96KC2 179 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 ALG12Q9BV10 488 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 TRBV5-5A0A0J9YX44 114 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 GGT3PA6NGU5 568 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 ANXA2P07355 339 aaKnown RBP11.78□□□□□ -0.52
CHD1L-208ENST00000488864 CELA3AP09093 270 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 UBBP0CG47 229 aa11.78□□□□□ -0.52
CHD1L-208ENST00000488864 UBCP0CG48 685 aaKnown RBP11.78□□□□□ -0.52
CHD1L-208ENST00000488864 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms